Plant and Seed Biology
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Plant and Seed Biology
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Scooped by Loïc Lepiniec
February 25, 2014 5:17 PM
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Endosperm breakdown in Arabidopsis requires heterodimers of the basic helix-loop-helix proteins ZHOUPI and INDUCER OF CBP EXPRESSION 1

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Rescooped by Loïc Lepiniec from MycorWeb Plant-Microbe Interactions
February 24, 2014 3:59 AM
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CYCLOPS, A DNA-Binding Transcriptional Activator, Orchestrates Symbiotic Root Nodule Development

CYCLOPS, A DNA-Binding Transcriptional Activator, Orchestrates Symbiotic Root Nodule Development | Plant and Seed Biology | Scoop.it

Nuclear calcium oscillations are a hallmark of symbiotically stimulated plant root cells. Activation of the central nuclear decoder, calcium- and calmodulin-dependent kinase (CCaMK), triggers the entire symbiotic program including root nodule organogenesis, but the mechanism of signal transduction by CCaMK was unknown. We show that CYCLOPS, a direct phosphorylation substrate of CCaMK, is a DNA-binding transcriptional activator. Two phosphorylated serine residues within the N-terminal negative regulatory domain of CYCLOPS are necessary for its activity. CYCLOPS binds DNA in a sequence-specific and phosphorylation-dependent manner and transactivates the NODULE INCEPTION (NIN) gene. A phosphomimetic version of CYCLOPS was sufficient to trigger root nodule organogenesis in the absence of rhizobia and CCaMK. CYCLOPS thus induces a transcriptional activation cascade, in which NIN and a heterotrimeric NF-Y complex act in hierarchical succession to initiate symbiotic root nodule development


Via Francis Martin
Scooped by Loïc Lepiniec
February 20, 2014 1:55 AM
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Mapping the Epigenetic Basis of Complex Traits

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Scooped by Loïc Lepiniec
February 18, 2014 9:03 AM
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Complexity and robustness of the flavonoid transcriptional regulatory network revealed by comprehensive analyses of MYB–bHLH–WDR complexes and their targets in Arabidopsis seed - Xu - 2013 - New Ph...

Complexity and robustness of the flavonoid transcriptional regulatory network revealed by comprehensive analyses of MYB–bHLH–WDR complexes and their targets in Arabidopsis seed - Xu - 2013 - New Ph... | Plant and Seed Biology | Scoop.it
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Scooped by Loïc Lepiniec
February 14, 2014 1:50 AM
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Leaf Shape Evolution Through Duplication, Regulatory Diversification, and Loss of a Homeobox Gene

Leaf Shape Evolution Through Duplication, Regulatory Diversification, and Loss of a Homeobox Gene | Plant and Seed Biology | Scoop.it
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Scooped by Loïc Lepiniec
February 4, 2014 1:23 AM
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PLOS Computational Biology: A Division in PIN-Mediated Auxin Patterning during Organ Initiation in Grasses

PLOS Computational Biology: A Division in PIN-Mediated Auxin Patterning during Organ Initiation in Grasses | Plant and Seed Biology | Scoop.it
PLOS Computational Biology is an open-access
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Scooped by Loïc Lepiniec
January 30, 2014 4:13 PM
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Cell - Structural Basis for DNA Binding Specificity by the Auxin-Dependent ARF Transcription Factors

Cell - Structural Basis for DNA Binding Specificity by the Auxin-Dependent ARF Transcription Factors | Plant and Seed Biology | Scoop.it
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Scooped by Loïc Lepiniec
January 24, 2014 7:08 AM
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A Peptide Hormone and Its Receptor Protein Kinase Regulate Plant Cell Expansion

Plant cells are immobile; thus, plant growth and development depend on cell expansion rather than cell migration. The molecular mechanism by which the plasma membrane initiates changes in the cell expansion rate remains elusive. We found that a secreted peptide, RALF (rapid alkalinization factor), suppresses cell elongation of the primary root by activating the cell surface receptor FERONIA in Arabidopsis thaliana. A direct peptide-receptor interaction is supported by specific binding of RALF to FERONIA and reduced binding and insensitivity to RALF-induced growth inhibition in feronia mutants. Phosphoproteome measurements demonstrate that the RALF-FERONIA interaction causes phosphorylation of plasma membrane H+–adenosine triphosphatase 2 at Ser899, mediating the inhibition of proton transport. The results reveal a molecular mechanism for RALF-induced extracellular alkalinization and a signaling pathway that regulates cell expansion.

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Rescooped by Loïc Lepiniec from GMOs, NBT & Sustainable agriculture
January 21, 2014 2:33 AM
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Plant domestication versus crop evolution: a conceptual framework for cereals and grain legumes

Plant domestication versus crop evolution: a conceptual framework for cereals and grain legumes | Plant and Seed Biology | Scoop.it

Domestication syndrome’ (DS) denotes differences between domesticated plants and their wild progenitors. Crop plants are dynamic entities; hence, not all parameters distinguishing wild progenitors from cultigens resulted from domestication. In this opinion article, we refine the DS concept using agronomic, genetic, and archaeobotanical considerations by distinguishing crucial domestication traits from traits that probably evolved post-domestication in Near Eastern grain crops. We propose that only traits showing a clear domesticated–wild dimorphism represent the pristine domestication episode, whereas traits showing a phenotypic continuum between wild and domesticated gene pools mostly reflect post-domestication diversification. We propose that our approach may apply to other crop types and examine its implications for discussing the timeframe of plant domestication and for modern plant science and breeding.

 


Via Christophe Jacquet
Christophe Jacquet's curator insight, January 6, 2014 8:39 AM

Highlights•

We introduce the concept of crucial ‘domestication syndrome’ (DS) traits.

Crucial DS traits are part of the features distinguishing crops from wild forms.

The crucial DS concept improves understanding of prehistoric domestication episodes.

Using the crucial DS concept may enhance future crop improvement capacity.

Scooped by Loïc Lepiniec
January 21, 2014 2:25 AM
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Advanced imaging techniques for the study of plant growth and development

Advanced imaging techniques for the study of plant growth and development | Plant and Seed Biology | Scoop.it
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Scooped by Loïc Lepiniec
February 25, 2014 9:52 AM
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Developmental Cell - A Regulatory Framework for Shoot Stem Cell Control Integrating Metabolic, Transcriptional, and Phytohormone Signals

Developmental Cell - A Regulatory Framework for Shoot Stem Cell Control Integrating Metabolic, Transcriptional, and Phytohormone Signals | Plant and Seed Biology | Scoop.it

The bHLH factor HECATE1 is a direct target of the plant stem cell regulator WUSCHELHECATE1 interacts with other bHLH factors to control stem cell proliferationWUSCHEL and HECATE1 activities converge on shared transcriptional targetsMobile cytokinin response factors define a feedback system downstream of HECATE1Summary

Plants continuously maintain pluripotent stem cells embedded in specialized tissues called meristems, which drive long-term growth and organogenesis. Stem cell fate in the shoot apical meristem (SAM) is controlled by the homeodomain transcription factor WUSCHEL (WUS) expressed in the niche adjacent to the stem cells. Here, we demonstrate that the bHLH transcription factor HECATE1 (HEC1) is a target of WUS and that it contributes to SAM function by promoting stem cell proliferation, while antagonizing niche cell activity. HEC1 represses the stem cell regulators WUS and CLAVATA3 (CLV3) and, like WUS, controls genes with functions in metabolism and hormone signaling. Among the targets shared by HEC1 and WUS are phytohormone response regulators, which we show to act as mobile signals in a universal feedback system. Thus, our work sheds light on the mechanisms guiding meristem function and suggests that the underlying regulatory system is far more complex than previously anticipated.

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Scooped by Loïc Lepiniec
February 20, 2014 2:14 AM
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Timing Mechanism Dependent on Cell Division Is Invoked by Polycomb Eviction in Plant Stem Cells

Timing Mechanism Dependent on Cell Division Is Invoked by Polycomb Eviction in Plant Stem Cells | Plant and Seed Biology | Scoop.it
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Scooped by Loïc Lepiniec
February 19, 2014 8:03 AM
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Multigeneration analysis reveals the inheritance, specificity, and patterns of CRISPR/Cas-induced gene modifications in Arabidopsis

Multigeneration analysis reveals the inheritance, specificity, and patterns of CRISPR/Cas-induced gene modifications in Arabidopsis | Plant and Seed Biology | Scoop.it
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Rescooped by Loïc Lepiniec from Plant Biology Teaching Resources (Higher Education)
February 14, 2014 8:29 AM
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Cell - The TPLATE Adaptor Complex Drives Clathrin-Mediated Endocytosis in Plants

Cell - The TPLATE Adaptor Complex Drives Clathrin-Mediated Endocytosis in Plants | Plant and Seed Biology | Scoop.it

"Here, we identified an eight-core-component protein complex, the TPLATE complex, essential for plant growth via its role as major adaptor module for clathrin-mediated endocytosis. This complex consists of evolutionarily unique proteins that associate closely with core endocytic elements. "

 

Here's a nice press release from VIB about this work

http://www.vib.be/en/news/Pages/Plants-recycle-too.aspx


Via Mary Williams
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Scooped by Loïc Lepiniec
February 4, 2014 1:34 AM
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Transcriptional circuitry underlying seed coat development in Arabidopsis

Transcriptional circuitry underlying seed coat development in Arabidopsis | Plant and Seed Biology | Scoop.it
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Scooped by Loïc Lepiniec
January 30, 2014 4:22 PM
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DNA-binding specificities of plant transcription factors and their potential to define target genes

DNA-binding specificities of plant transcription factors and their potential to define target genes | Plant and Seed Biology | Scoop.it
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Scooped by Loïc Lepiniec
January 30, 2014 4:05 PM
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Timing Mechanism Dependent on Cell Division Is Invoked by Polycomb Eviction in Plant Stem Cells

Timing Mechanism Dependent on Cell Division Is Invoked by Polycomb Eviction in Plant Stem Cells | Plant and Seed Biology | Scoop.it
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Scooped by Loïc Lepiniec
January 21, 2014 3:39 AM
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Seaweed Filament : l'impression 3D écologique !

Seaweed Filament : l'impression 3D écologique ! | Plant and Seed Biology | Scoop.it
Il deviendra possible d'imprimer des objets en 3D sans utiliser de plastique : le Seaweed Filament.
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Scooped by Loïc Lepiniec
January 21, 2014 2:10 AM
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miR828 and miR858 regulate homoeologous MYB2 gene functions in Arabidopsis trichome and cotton fibre development : Nature Communications

miR828 and miR858 regulate homoeologous MYB2 gene functions in Arabidopsis trichome and cotton fibre development : Nature Communications | Plant and Seed Biology | Scoop.it
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