Plant and Seed Biology
38.4K views | +0 today
Follow
Plant and Seed Biology
Your new post is loading...
Your new post is loading...
Scooped by Loïc Lepiniec
April 4, 2014 1:56 AM
Scoop.it!

Poly(A)-tail profiling reveals an embryonic switch in translational control : Nature : Nature Publishing Group

Poly(A)-tail profiling reveals an embryonic switch in translational control : Nature : Nature Publishing Group | Plant and Seed Biology | Scoop.it
No comment yet.
Scooped by Loïc Lepiniec
April 3, 2014 3:45 AM
Scoop.it!

Multi-gene engineering of triacylglycerol metabolism boosts seed oil content in Arabidopsis

No comment yet.
Scooped by Loïc Lepiniec
March 30, 2014 4:57 PM
Scoop.it!

BMC Plant Biology | Abstract | Soybean GmMYB73 promotes lipid accumulation in transgenic plants

Soybean is one of the most important oil crops. The regulatory genes involved in oil accumulation are largely unclear. We initiated studies to identify genes that regulate this process.
No comment yet.
Scooped by Loïc Lepiniec
March 28, 2014 3:10 AM
Scoop.it!

Wheat lag

Growth in yields of the cereal must double if the Green Revolution is to be put back on track.
No comment yet.
Rescooped by Loïc Lepiniec from Plant Biology Teaching Resources (Higher Education)
March 25, 2014 8:16 AM
Scoop.it!

Play it Hard - Norman Borlaug 100 Year Tribute - YouTube

The International Center for Maize and Wheat Improvement (CIMMYT) and Biology Fortified have produced a special video tribute to the late Dr. Norman Borlaug,...

Via Mary Williams
No comment yet.
Scooped by Loïc Lepiniec
March 25, 2014 2:42 AM
Scoop.it!

Arguments in the evo-devo debate: say it with flowers!

No comment yet.
Scooped by Loïc Lepiniec
March 23, 2014 7:20 AM
Scoop.it!

Editorial overview: Synthetic plant biology: the roots of a bio-based society, Current Op Plant Biotech, in press

Editorial overview: Synthetic plant biology: the roots of a bio-based society, Current Op Plant Biotech, in press | Plant and Seed Biology | Scoop.it
No comment yet.
Scooped by Loïc Lepiniec
March 17, 2014 3:16 AM
Scoop.it!

miRNAs trigger widespread epigenetically activated siRNAs from transposons in Arabidopsis : Nature : Nature Publishing Group

miRNAs trigger widespread epigenetically activated siRNAs from transposons in Arabidopsis : Nature : Nature Publishing Group | Plant and Seed Biology | Scoop.it
In plants, post-transcriptional gene silencing (PTGS) is mediated by DICER-LIKE 1 (DCL1)-dependent microRNAs (miRNAs), which also trigger 21-nucleotide secondary short interfering RNAs (siRNAs) via RNA-DEPENDENT RNA POLYMERASE 6 (RDR6), DCL4 and ARGONAUTE 1 (AGO1), whereas transcriptional gene silencing (TGS) of transposons is mediated by 24-nucleotide heterochromatic (het)siRNAs, RDR2, DCL3 and AGO4 (ref. 4). Transposons can also give rise to abundant 21-nucleotide /`epigenetically activated/' small interfering RNAs (easiRNAs) in DECREASED DNA METHYLATION 1 (ddm1) and DNA METHYLTRANSFERASE 1 (met1) mutants, as well as in the vegetative nucleus of pollen grains and in dedifferentiated plant cell cultures. Here we show that easiRNAs in Arabidopsis thaliana resemble secondary siRNAs, in that thousands of transposon transcripts are specifically targeted by more than 50 miRNAs for cleavage and processing by RDR6. Loss of RDR6, DCL4 or DCL1 in a ddm1 background results in loss of 21-nucleotide easiRNAs and severe infertility, but 24-nucleotide hetsiRNAs are partially restored, supporting an antagonistic relationship between PTGS and TGS. Thus miRNA-directed easiRNA biogenesis is a latent mechanism that specifically targets transposon transcripts, but only when they are epigenetically reactivated during reprogramming of the germ line. This ancient recognition mechanism may have been retained both by transposons to evade long-term heterochromatic silencing and by their hosts for genome defence.
No comment yet.
Scooped by Loïc Lepiniec
March 12, 2014 4:11 AM
Scoop.it!

The TRANSPLANTA collection of Arabidopsis lines: a resource for functional analysis of transcription factors based on their conditional overexpression - Coego - 2014 - The Plant Journal -

The TRANSPLANTA collection of Arabidopsis lines: a resource for functional analysis of transcription factors based on their conditional overexpression - Coego - 2014 - The Plant Journal - | Plant and Seed Biology | Scoop.it
No comment yet.
Scooped by Loïc Lepiniec
March 8, 2014 5:26 AM
Scoop.it!

Evolution of transcription factor binding in metazoans: mechanisms and functional implications : Nature Reviews Genetics

Evolution of transcription factor binding in metazoans: mechanisms and functional implications : Nature Reviews Genetics | Plant and Seed Biology | Scoop.it
No comment yet.
Scooped by Loïc Lepiniec
March 6, 2014 3:54 AM
Scoop.it!

Synthetic nucleases for genome engineering in plants: prospects for a bright future - Puchta - 2013 - The Plant Journal

No comment yet.
Scooped by Loïc Lepiniec
March 5, 2014 11:10 AM
Scoop.it!

Viruses Reconsidered | The Scientist Magazine®

Viruses Reconsidered | The Scientist Magazine® | Plant and Seed Biology | Scoop.it
The discovery of more and more viruses of record-breaking size calls for a reclassification of life on Earth.
 
No comment yet.
Scooped by Loïc Lepiniec
March 1, 2014 11:12 AM
Scoop.it!

Eight types of stem cells in the life cycle of the moss Physcomitrella patens

Eight types of stem cells in the life cycle of the moss Physcomitrella patens | Plant and Seed Biology | Scoop.it

Stem cells self-renew and produce cells that differentiate to become the source of the plant body. The moss Physcomitrella patens forms eight types of stem cells during its life cycle and serves as a useful model in which to explore the evolution of such cells. The common ancestor of land plants is inferred to have been haplontic and to have formed stem cells only in the gametophyte generation. A single stem cell would have been maintained in the ancestral gametophyte meristem, as occurs in extant basal land plants. During land plant evolution, stem cells diverged in the gametophyte generation to form different types of body parts, including the protonema and rhizoid filaments, leafy-shoot and thalloid gametophores, and gametangia formed in moss. A simplex meristem with a single stem cell was acquired in the sporophyte generation early in land plant evolution. Subsequently, sporophyte stem cells became multiple in the meristem and were elaborated further in seed plant lineages, although the evolutionary origin of niche cells, which maintain stem cells is unknown. Comparisons of gene regulatory networks are expected to give insights into the general mechanisms of stem cell formation and maintenance in land plants and provide information about their evolution. P. patens develops at least seven types of simplex meristem in the gametophyte and at least one type in the sporophyte generation and is a good material for regulatory network comparisons. In this review, we summarize recently revealed molecular mechanisms of stem cell initiation and maintenance in the moss.

No comment yet.
Scooped by Loïc Lepiniec
April 3, 2014 10:02 AM
Scoop.it!

Metabolic engineering approaches for production of biochemicals in food and medicinal plants

Metabolic engineering approaches for production of biochemicals in food and medicinal plants | Plant and Seed Biology | Scoop.it


Metabolic engineering strategies for production of plant natural products.

Methods for genome targeting of mutations and gene insertions.

Recent advances for elucidation of plant secondary biosynthetic pathways.

Metabolic engineering of paclitaxel biosynthesis in vitro.

Production of β-carotene in Golden Rice and other food crops.

 

No comment yet.
Scooped by Loïc Lepiniec
April 2, 2014 12:09 PM
Scoop.it!

Arabidopsis Information Portal | Preview 2

Arabidopsis Information Portal | Preview 2 | Plant and Seed Biology | Scoop.it
No comment yet.
Scooped by Loïc Lepiniec
March 30, 2014 4:44 PM
Scoop.it!

Genetic Control of Plant Development by Overriding a Geometric Division Rule: Developmental Cell

Genetic Control of Plant Development by Overriding a Geometric Division Rule: Developmental Cell | Plant and Seed Biology | Scoop.it
No comment yet.
Scooped by Loïc Lepiniec
March 26, 2014 2:36 AM
Scoop.it!

Plant nanobionics approach to augment photosynthesis and biochemical sensing : Nature Materials

Imparting non-native functions to living plants using nanoparticles opens the possibility of creating synthetic materials that can grow and repair themselves using sunlight, water and carbon dioxide. It is now shown that, both in plant extracts and living leaves, carbon nanotubes traverse and localize within the lipid envelope of plant chloroplasts, enhance their photosynthetic activity, and enable near-infrared fluorescence monitoring of nitric oxide.
No comment yet.
Scooped by Loïc Lepiniec
March 25, 2014 2:49 AM
Scoop.it!

Evolutionary mechanisms for establishing eukaryotic cellular complexity

Evolutionary mechanisms for establishing eukaryotic cellular complexity | Plant and Seed Biology | Scoop.it
No comment yet.
Scooped by Loïc Lepiniec
March 25, 2014 2:36 AM
Scoop.it!

A Two-Step Process for Epigenetic Inheritance in Arabidopsis

A Two-Step Process for Epigenetic Inheritance in Arabidopsis | Plant and Seed Biology | Scoop.it
No comment yet.
Scooped by Loïc Lepiniec
March 17, 2014 4:13 AM
Scoop.it!

Disruption of Mediator rescues the stunted growth of a lignin-deficient Arabidopsis mutant : Nature : Nature Publishing Group

Lignin is a phenylpropanoid-derived heteropolymer important for the strength and rigidity of the plant secondary cell wall. Genetic disruption of lignin biosynthesis has been proposed as a means to improve forage and bioenergy crops, but frequently results in stunted growth and developmental abnormalities, the mechanisms of which are poorly understood. Here we show that the phenotype of a lignin-deficient Arabidopsis mutant is dependent on the transcriptional co-regulatory complex, Mediator. Disruption of the Mediator complex subunits MED5a (also known as REF4) and MED5b (also known as RFR1) rescues the stunted growth, lignin deficiency and widespread changes in gene expression seen in the phenylpropanoid pathway mutant ref8, without restoring the synthesis of guaiacyl and syringyl lignin subunits. Cell walls of rescued med5a/5b ref8 plants instead contain a novel lignin consisting almost exclusively of p-hydroxyphenyl lignin subunits, and moreover exhibit substantially facilitated polysaccharide saccharification. These results demonstrate that guaiacyl and syringyl lignin subunits are largely dispensable for normal growth and development, implicate Mediator in an active transcriptional process responsible for dwarfing and inhibition of lignin biosynthesis, and suggest that the transcription machinery and signalling pathways responding to cell wall defects may be important targets to include in efforts to reduce biomass recalcitrance.
No comment yet.
Scooped by Loïc Lepiniec
March 16, 2014 3:41 AM
Scoop.it!

The Functional Consequences of Variation in Transcription Factor Binding

The Functional Consequences of Variation in Transcription Factor Binding | Plant and Seed Biology | Scoop.it
PLOS Genetics is an open-access
No comment yet.
Scooped by Loïc Lepiniec
March 10, 2014 5:32 PM
Scoop.it!

Photoperiodic Control of the Floral Transition through a Distinct Polycomb Repressive Complex

Photoperiodic Control of the Floral Transition through a Distinct Polycomb Repressive Complex | Plant and Seed Biology | Scoop.it
No comment yet.
Rescooped by Loïc Lepiniec from MycorWeb Plant-Microbe Interactions
March 7, 2014 1:42 AM
Scoop.it!

Mapping the Epigenetic Basis of Complex Traits

Mapping the Epigenetic Basis of Complex Traits | Plant and Seed Biology | Scoop.it

Quantifying the impact of heritable epigenetic variation on complex traits is an emerging challenge in population genetics. Here, we analyze a population of isogenic Arabidopsis lines that segregate experimentally induced DNA methylation changes at hundreds of regions across the genome. We demonstrate that several of these differentially methylated regions (DMRs) act as bona fide epigenetic quantitative trait loci (QTLepi), accounting for 60 to 90% of the heritability for two complex traits, flowering time and primary root length. These QTLepi are reproducible and can be subjected to artificial selection. Many of the experimentally induced DMRs are also variable in natural populations of this species and may thus provide an epigenetic basis for Darwinian evolution independently of DNA sequence changes.


Via Francis Martin
No comment yet.
Scooped by Loïc Lepiniec
March 5, 2014 11:15 AM
Scoop.it!

Epigenetics: The sins of the father

Epigenetics: The sins of the father | Plant and Seed Biology | Scoop.it
The roots of inheritance may extend beyond the genome, but the mechanisms remain a puzzle.
No comment yet.
Scooped by Loïc Lepiniec
March 4, 2014 5:35 PM
Scoop.it!

Craig Venter Starts DNA-Scanning Company to Boost Longevity (1) - Businessweek

Craig Venter Starts DNA-Scanning Company to Boost Longevity (1) - Businessweek | Plant and Seed Biology | Scoop.it
J. Craig Venter, the man who raced
the U.S. government to sequence the first human genome, has a
new goal: Help everyone live to 100, in good health.
No comment yet.