Immunology
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Immunology
Teaching and Learning Immunology. Information you never would have searched for!
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Suggested by LIGHTING
November 5, 2017 3:28 AM
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Early Transcriptional Divergence Marks Virus-Specific Primary Human CD8+ T Cells in Chronic versus Acute Infection

Early Transcriptional Divergence Marks Virus-Specific Primary Human CD8+ T Cells in Chronic versus Acute Infection | Immunology | Scoop.it
Wolski et. al show that transcriptional dysregulation of metabolic, nucleosomal, and
immune processes in virus-specific CD8+ T cells during early persistent HCV infection
is both under tight transcriptional control and associated with differences in predictors
of disease outcome, like patient sex, age, and the presence of HCV-specific CD4+ T cells.
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Scooped by Gilbert C FAURE
November 2, 2017 12:17 PM
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Cytomegalovirus (CMV) Epitope–Specific CD4+ T Cells Are Inflated in HIV+ CMV+ Subjects

Cytomegalovirus (CMV) Epitope–Specific CD4+ T Cells Are Inflated in HIV+ CMV+ Subjects | Immunology | Scoop.it
Select CMV epitopes drive life-long CD8+ T cell memory inflation, but the extent of CD4 memory inflation is poorly studied. CD4+ T cells specific for human CMV (HCMV) are elevated in HIV+ HCMV+ subjects. To determine whether HCMV epitope–specific CD4+ T cell memory inflation occurs during HIV infection, we used HLA-DR7 (DRB1*07:01) tetramers loaded with the glycoprotein B DYSNTHSTRYV (DYS) epitope to characterize circulating CD4+ T cells in coinfected HLA-DR7+ long-term nonprogressor HIV subjects with undetectable HCMV plasma viremia. DYS-specific CD4+ T cells were inflated among these HIV+ subjects compared with those from an HIV− HCMV+ HLA-DR7+ cohort or with HLA-DR7–restricted CD4+ T cells from the HIV-coinfected cohort that were specific for epitopes of HCMV phosphoprotein-65, tetanus toxoid precursor, EBV nuclear Ag 2, or HIV gag protein. Inflated DYS-specific CD4+ T cells consisted of effector memory or effector memory–RA+ subsets with restricted TCRβ usage and nearly monoclonal CDR3 containing novel conserved amino acids. Expression of this near-monoclonal TCR in a Jurkat cell–transfection system validated fine DYS specificity. Inflated cells were polyfunctional, not senescent, and displayed high ex vivo levels of granzyme B, CX3CR1, CD38, or HLA-DR but less often coexpressed CD38+ and HLA-DR+. The inflation mechanism did not involve apoptosis suppression, increased proliferation, or HIV gag cross-reactivity. Instead, the findings suggest that intermittent or chronic expression of epitopes, such as DYS, drive inflation of activated CD4+ T cells that home to endothelial cells and have the potential to mediate cytotoxicity and vascular disease.
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Scooped by Gilbert C FAURE
November 1, 2017 12:29 PM
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B cell activation and the germinal centre response | British Society for Immunology

B cell activation and the germinal centre response | British Society for Immunology | Immunology | Scoop.it
B cell activation B cells are activated when their B cell receptor (BCR) binds to either soluble or membrane bound antigen. This activates the BCR to form microclusters and trigger downstream signalling cascades. The microcluster eventually undergoes a contraction phase and forms an immunological synapse, this allows for a stable interaction between B and T cells to provide bidirectional activation signals. 
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Suggested by Société Francaise d'Immunologie
October 30, 2017 6:26 AM
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Epidermal Growth Factor Receptor Expression Licenses Type-2 Helper T Cells to Function in a T Cell Receptor-Independent Fashion

Epidermal Growth Factor Receptor Expression Licenses Type-2 Helper T Cells to Function in a T Cell Receptor-Independent Fashion | Immunology | Scoop.it
At the site of infection, Th2 cells secrete IL-13 upon exposure to IL-33. Minutti
et al. now show that TCR-induced expression of the EGFR and its ligand amphiregulin
was essential for IL-33-induced IL-13 secretion, revealing a mechanism whereby antigen-specific
activation controls the innate effector function of Th2 cells.
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Scooped by Gilbert C FAURE
October 27, 2017 11:53 AM
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Molecular and Functional Characterization of Lymphoid Progenitor Subsets Reveals a Bipartite Architecture of Human Lymphopoiesis

Molecular and Functional Characterization of Lymphoid Progenitor Subsets Reveals a Bipartite Architecture of Human Lymphopoiesis | Immunology | Scoop.it
The development pathways of human lymphoid cells remain unclear. Alhaj Hussen et al.
show that human lymphoid cells stem from two functionally specialized populations
of CD127− and CD127+ early lymphoid progenitors. They propose a “two-family” model
of human lymphopoiesis that differs from the standard model of hematopoiesis established
in mice.
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Scooped by Gilbert C FAURE
October 26, 2017 12:20 PM
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Beyond binding: antibody effector functions in infectious diseases

Beyond binding: antibody effector functions in infectious diseases | Immunology | Scoop.it
Review
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Scooped by Gilbert C FAURE
October 20, 2017 2:14 PM
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Cell Death and Differentiation - MOMP, cell suicide as a BCL-2 family business

Cell Death and Differentiation - MOMP, cell suicide as a BCL-2 family business | Immunology | Scoop.it
Cell death and differentiation is a monthly research journal focused on the exciting field of programmed cell death and apoptosis. It provides a single accessible source of information for both scientists and clinicians, keeping them up-to-date with advances in the field. It encompasses programmed cell death, cell death induced by toxic agents, differentiation and the interrelation of these with cell proliferation.
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Scooped by Gilbert C FAURE
October 16, 2017 5:57 AM
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Innate Immunity

Innate Immunity | Immunology | Scoop.it
Higher Education Excellence. Online, Free and Open Courses
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Scooped by Gilbert C FAURE
October 14, 2017 4:08 AM
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Unveiling the Peptide Motifs of HLA-C and HLA-G from Naturally Presented Peptides and Generation of Binding Prediction Matrices

Unveiling the Peptide Motifs of HLA-C and HLA-G from Naturally Presented Peptides and Generation of Binding Prediction Matrices | Immunology | Scoop.it
The classical HLA-C and the nonclassical HLA-E and HLA-G molecules play important roles both in the innate and adaptive immune system. Starting already during embryogenesis and continuing throughout our lives, these three Ags exert major functions in immune tolerance, defense against infections, and anticancer immune responses. Despite these important roles, identification and characterization of the peptides presented by these molecules has been lacking behind the more abundant HLA-A and HLA-B gene products. In this study, we elucidated the peptide specificities of these HLA molecules using a comprehensive analysis of naturally presented peptides. To that end, the 15 most frequently expressed HLA-C alleles as well as HLA-E*01:01 and HLA-G*01:01 were transfected into lymphoblastoid C1R cells expressing low endogenous HLA. Identification of naturally presented peptides was performed by immunoprecipitation of HLA and subsequent analysis of HLA-bound peptides by liquid chromatographic tandem mass spectrometry. Peptide motifs of HLA-C unveil anchors in position 2 or 3 with high variances between allotypes, and a less variable anchor at the C-terminal end. The previously reported small ligand repertoire of HLA-E was confirmed within our analysis, and we could show that HLA-G combines a large ligand repertoire with distinct features anchoring peptides at positions 3 and 9, supported by an auxiliary anchor in position 1 and preferred residues in positions 2 and 7. The wealth of HLA ligands resulted in prediction matrices for octa-, nona-, and decamers. Matrices were validated in terms of their binding prediction and compared with the latest NetMHC prediction algorithm NetMHCpan-3.0, which demonstrated their predictive power.

This article is featured in In This Issue , p.[2609][1]

[1]: /lookup/volpage/199/2609
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Scooped by Gilbert C FAURE
October 13, 2017 11:23 AM
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Integration of Kinase and Calcium Signaling at the Level of Chromatin Underlies Inducible Gene Activation in T Cells

Integration of Kinase and Calcium Signaling at the Level of Chromatin Underlies Inducible Gene Activation in T Cells | Immunology | Scoop.it
TCR signaling pathways cooperate to activate the inducible transcription factors NF-κB, NFAT, and AP-1. In this study, using the calcium ionophore ionomycin and/or PMA on Jurkat T cells, we show that the gene expression program associated with activation of TCR signaling is closely related to specific chromatin landscapes. We find that calcium and kinase signaling cooperate to induce chromatin remodeling at ∼2100 chromatin regions, which demonstrate enriched binding motifs for inducible factors and correlate with target gene expression. We found that these regions typically function as inducible enhancers. Many of these elements contain composite NFAT/AP-1 sites, which typically support cooperative binding, thus further reinforcing the need for cooperation between calcium and kinase signaling in the activation of genes in T cells. In contrast, treatment with PMA or ionomycin alone induces chromatin remodeling at far fewer regions (∼600 and ∼350, respectively), which mostly represent a subset of those induced by costimulation. This suggests that the integration of TCR signaling largely occurs at the level of chromatin, which we propose plays a crucial role in regulating T cell activation.
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Scooped by Gilbert C FAURE
October 13, 2017 7:54 AM
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Diagnosing antiphospholipid syndrome: 'extra-criteria' manifestations and technical advances

Diagnosing antiphospholipid syndrome: 'extra-criteria' manifestations and technical advances
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Scooped by Gilbert C FAURE
October 11, 2017 7:47 AM
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Clinical & Experimental Immunology - - Wiley Online Library

Clinical & Experimental Immunology - - Wiley Online Library | Immunology | Scoop.it
Innate immunity and infections
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Scooped by Gilbert C FAURE
October 10, 2017 7:01 AM
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Neutrophil extracellular traps in immunity and disease : Nature Reviews Immunology : Nature Research

Neutrophil extracellular traps in immunity and disease : Nature Reviews Immunology : Nature Research | Immunology | Scoop.it
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Scooped by Gilbert C FAURE
November 3, 2017 7:29 AM
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Programme BSI congress

Programme BSI congress | Immunology | Scoop.it
Open programme in a new window
Gilbert C FAURE's insight:
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Scooped by Gilbert C FAURE
November 1, 2017 12:30 PM
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Mast cells acquire MHCII from dendritic cells during skin inflammation

Mast cells acquire MHCII from dendritic cells during skin inflammation | Immunology | Scoop.it
Mast cells (MCs) and dendritic cells (DCs) are essential innate sentinels populating host-environment interfaces. Using longitudinal intravital multiphoton microscopy of DCGFP/MCRFP reporter mice, we herein provide in vivo evidence that migratory DCs execute targeted cell-to-cell interactions with stationary MCs before leaving the inflamed skin to draining lymph nodes. During initial stages of skin inflammation, DCs dynamically scan MCs, whereas at a later stage, long-lasting interactions predominate. These innate-to-innate synapse-like contacts ultimately culminate in DC-to-MC molecule transfers including major histocompatibility complex class II (MHCII) proteins enabling subsequent ex vivo priming of allogeneic T cells with a specific cytokine signature. The extent of MHCII transfer to MCs correlates with their T cell priming efficiency. Importantly, preventing the cross talk by preceding DC depletion decreases MC antigen presenting capacity and T cell–driven inflammation. Consequently, we identify an innate intercellular communication arming resident MCs with key DC functions that might contribute to the acute defense potential during critical periods of migration-based DC absence.
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Scooped by Gilbert C FAURE
October 31, 2017 8:59 AM
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TH2 cell development and function

TH2 cell development and function | Immunology | Scoop.it
Review
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Suggested by Société Francaise d'Immunologie
October 29, 2017 7:42 AM
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Allele-Specific HLA Loss and Immune Escape in Lung Cancer Evolution

Allele-Specific HLA Loss and Immune Escape in Lung Cancer Evolution | Immunology | Scoop.it
Development of the bioinformatics tool LOHHLA allows precise measurement of allele-specific
HLA copy number, improves the accuracy in neoantigen prediction, and uncovers insights
into how immune escape contributes to tumor evolution in non-small-cell lung cancer.
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Scooped by Gilbert C FAURE
October 27, 2017 11:51 AM
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H3K27 Methylation Dynamics during CD4 T Cell Activation: Regulation of JAK/STAT and IL12RB2 Expression by JMJD3

H3K27 Methylation Dynamics during CD4 T Cell Activation: Regulation of JAK/STAT and IL12RB2 Expression by JMJD3 | Immunology | Scoop.it
The changes to the epigenetic landscape in response to Ag during CD4 T cell activation have not been well characterized. Although CD4 T cell subsets have been mapped globally for numerous epigenetic marks, little has been done to study their dynamics early after activation. We have studied changes to promoter H3K27me3 during activation of human naive and memory CD4 T cells. Our results show that these changes occur relatively early (1 d) after activation of naive and memory cells and that demethylation is the predominant change to H3K27me3 at this time point, reinforcing high expression of target genes. Additionally, inhibition of the H3K27 demethylase JMJD3 in naive CD4 T cells demonstrates how critically important molecules required for T cell differentiation, such as JAK2 and IL12RB2, are regulated by H3K27me3. Our results show that H3K27me3 is a dynamic and important epigenetic modification during CD4 T cell activation and that JMJD3-driven H3K27 demethylation is critical for CD4 T cell function.
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Scooped by Gilbert C FAURE
October 26, 2017 2:48 AM
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Immunology and Cell Biology - Human IgG2- and IgG4-expressing memory B cells display enhanced molecular and phenotypic signs of maturity and accumulate with age

Immunology and Cell Biology - Human IgG2- and IgG4-expressing memory B cells display enhanced molecular and phenotypic signs of maturity and accumulate with age | Immunology | Scoop.it
Immunology and Cell Biology focuses on the general functioning of the immune system in its broadest sense, with a particular emphasis on its cell biology. Areas that are covered include but are not limited to: Cellular immunology, Innate and adaptive immunity, Immune responses to pathogens,Tumour immunology,Immunopathology, Immunotherapy, Immunogenetics, Immunological studies in humans and model organisms (including mouse, rat, Drosophila etc)
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Scooped by Gilbert C FAURE
October 16, 2017 7:17 AM
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Interconnected subsets of memory follicular helper T cells have different effector functions

Interconnected subsets of memory follicular helper T cells have different effector functions | Immunology | Scoop.it
Article
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Scooped by Gilbert C FAURE
October 14, 2017 10:05 AM
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Revisiting the Road Map of Medullary Thymic Epithelial Cell Differentiation

Revisiting the Road Map of Medullary Thymic Epithelial Cell Differentiation | Immunology | Scoop.it
The basic two-step terminal differentiation model of the medullary thymic epithelial cell (mTEC) lineage from immature MHC class II (MHCII)lo to mature MHCIIhi mTECs has recently been extended to include a third stage, namely the post-Aire MHCIIlo subset as identified by lineage-tracing models. However, a suitable surface marker distinguishing the phenotypically overlapping pre- from the post-Aire MHCIIlo stage has been lacking. In this study, we introduce the lectin Tetragonolobus purpureas agglutinin (TPA) as a novel cell surface marker that allows for such delineation. Based on our data, we derived the following sequence of mTEC differentiation: TPAloMHCIIlo → TPAloMHCIIhi → TPAhiMHCIIhi → TPAhiMHCIIlo. Surprisingly, in the steady-state postnatal thymus TPAloMHCIIlo pre-Aire rather than terminally differentiated post-Aire TPAhiMHCIIlo mTECs were marked for apoptosis at an exceptionally high rate of ∼70%. Hence, only the minor cycling fraction of the MHCIIlo subset (<20%) potentially qualified as mTEC precursors. FoxN1 expression inversely correlated with the fraction of slow cycling and apoptotic cells within the four TPA subsets. TPA also further subdivided human mTECs, although with different subset distribution. Our revised road map emphazises close parallels of terminal mTEC development with that of skin, undergoing an alternative route of cell death, namely cornification rather than apoptosis. The high rate of apoptosis in pre-Aire MHCIIlo mTECs points to a “quality control” step during early mTEC differentiation.
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Scooped by Gilbert C FAURE
October 13, 2017 1:12 PM
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Arginine methylation catalyzed by PRMT1 is required for B cell activation and differentiation

Arginine methylation catalyzed by PRMT1 is required for B cell activation and differentiation | Immunology | Scoop.it
Article
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Scooped by Gilbert C FAURE
October 13, 2017 11:23 AM
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PTEN drives Th17 cell differentiation by preventing IL-2 production

PTEN drives Th17 cell differentiation by preventing IL-2 production | Immunology | Scoop.it
T helper 17 (Th17) cells are a CD4+ T cell subset that produces IL-17A to mediate inflammation and autoimmunity. IL-2 inhibits Th17 cell differentiation. However, the mechanism by which IL-2 is suppressed during Th17 cell differentiation remains unclear. Here, we show that phosphatase and tensin homologue (PTEN) is a key factor that regulates Th17 cell differentiation by suppressing IL-2 production. Th17-specific Pten deletion ( Ptenfl/flIl17acre ) impairs Th17 cell differentiation in vitro and ameliorated symptoms of experimental autoimmune encephalomyelitis (EAE), a model of Th17-mediated autoimmune disease. Mechanistically, Pten deficiency up-regulates IL-2 and phosphorylation of STAT5, but reduces STAT3 phosphorylation, thereby inhibiting Th17 cell differentiation. PTEN inhibitors block Th17 cell differentiation in vitro and in the EAE model. Thus, PTEN plays a key role in Th17 cell differentiation by blocking IL-2 expression.
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Suggested by Société Francaise d'Immunologie
October 12, 2017 2:09 AM
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Multicellularity enriches the entrainment of Arabidopsis circadian clock

Multicellularity enriches the entrainment of Arabidopsis circadian clock | Immunology | Scoop.it
The phase response curve (PRC) of the circadian clock provides one of the most significant indices for anticipating entrainment of outer cycles, despite the difficulty of making precise PRC determinations in experiments. We characterized the PRC of the Arabidopsis thaliana circadian clock on the basis of its phase-locking property to variable periodic pulse perturbations. Experiments revealed that the PRC changed remarkably from continuous to discontinuous fashion, depending on the oscillation amplitude. Our hypothesis of amplitude-dependent adaptability to outer cycles was successfully clarified by elucidation of this transition of PRC as a change in the collective response of the circadian oscillator network. These findings provide an essential criterion against which to evaluate the precision of PRC measurement and an advanced understanding of the adaptability of plant circadian systems to environmental conditions.
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Suggested by Société Francaise d'Immunologie
October 10, 2017 1:57 PM
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Genome-wide functional analysis reveals central signaling regulators of lymphatic endothelial cell migration and remodeling

Genome-wide functional analysis reveals central signaling regulators of lymphatic endothelial cell migration and remodeling | Immunology | Scoop.it
Lymphatic vessels return fluid and immune cells from peripheral tissues back to the circulation. The growth of new lymphatic vessels and their remodeling are critical for clearing infection and for metastasis of many cancer subtypes. Williams et al . compared the results of their functional siRNA screens with previously published mRNA data sets to identify genes that regulated lymphatic endothelial cell migration, a process critical for lymphatic vessel growth and remodeling, and genes that functioned in both lymphatic and blood endothelial cell migration. One of the top candidates to emerge from these analyses, the glycan-binding protein Galectin-1 not only promoted lymphatic vessel growth but also was important for maintaining lymphatic endothelial cell identity. Further analyses of the authors’ results may reveal lymphatic vessel–associated proteins that could be targeted to prevent edema, improve infection outcomes, or limit metastasis.
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