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Scooped by Gerd Moe-Behrens
December 16, 2011 11:07 AM
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Synthetic Biology and its Promise

Synthetic Biology and its Promise | SynBioFromLeukipposInstitute | Scoop.it
Synthetic Biology is going to be huge all over the world very soon. No wonder, the promise is incredible. According to Jeurgen Pleiss, possible applications of synthetic biology include:

1. Gene...
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Scooped by Gerd Moe-Behrens
December 16, 2011 10:46 AM
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I Heard You Like Feedback Loops | Oscillator, Scientific American Blog Network

I Heard You Like Feedback Loops | Oscillator, Scientific American Blog Network | SynBioFromLeukipposInstitute | Scoop.it

"In some labs, biology and computer science are converging. On the one hand, computer scientists are working towards creating computer chips inspired by the circuitry of ..."

A nice news and views. Thanks Christina Agapakis.
Very interesting that you mentioned Systems Theory.
This provides in my opinion the new paradigm in science. We have moved from a reductionistic hypothesis driven science to a data driven scientific concept. Two computer developments are responsible for the paradigm change. The first is the enormous storage capacity in the cloud. We talk about a magnitude in the petabyte scale. One petabyte is equal to one quadrillion bytes or 1000 tetrabytes. This is 10exp15 bytes. Google processes about 24 petabytes per day. The second is that a huge number of computers have been connected and organized in social networks. a huge number of computers are now connected via the Internet. We now have access to the huge data- amount from many locations. In addition: We have twitter, facebook and many other social networks, which give a context for the enormous data-amount.

These changes have resulted in huge quantities of data and complex systems. We have a data flooding. This a problem normal science cannot solve. The structures of the science world were designed to fit a pre-computer age. The hypothesis method can deal with simple correlations between A and B. But the method fails if the problem becomes more complex with many factors, eg A to I or even more. This is too complex for deducing an empirical consequence.

A novel theoretical base for science has evolved. Groundbreaking theories have been published:
As you have mentioned: 1948 – Norbert Wiener: Cybernetics or Control and communication in the animal and machine.
Moreover interesting is also:
1955 – William Ross Ashby: Introduction to cybernetics.
1968 – Ludwig Bertalanffy: General System theory: Foundations, Development, Applications.
Notable further developments of systems theory are: Heinz Foerster’s second order-cybernetics, Ilya Prigogine’s work on self-organization and his systems theory concepts with thermodynamics, and Mitchell Feigenbaum’s work on chaos theory.
Systems theory is a fundament for software and thus influences the scientific method. Contemporary applications of systems theory are systems biology and synthetic biology. This philosophical movement has two components: Idealism and systems theory.
Idealism:
Idealism is based on Plato’s theory of forms (ideas). In line with this theory, cybernetics assumes that the human nervous system calculates reality. This means:
Our brain calculates a model of an object.
The human reception is the basis of the scientific method.
The key tools are mathematics and logic.
The result of this calculation is a model, which is not identical to the object.
Thus, it is impossible to achieve knowledge about the world such as it exists independent of us
Systems theory:
In systems theory, contemporary science moves from reductionism to a more holistic position. A system is a set of interacting or independent components forming an integrated whole. Systems behavior involves input, processing and output of data, and can be self-organizing and self-regulating by feedback. Ref http://bit.ly/kjOVs2 and http://bit.ly/lMbKc8

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December 14, 2011 12:22 PM
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DNA2.0 Integrates Synthetic Biology Open Language (SBOL) Into Gene Designer

DNA2.0 Integrates Synthetic Biology Open Language (SBOL) Into Gene Designer | SynBioFromLeukipposInstitute | Scoop.it

DNA2.0 announces the integration of the first standardized information exchange framework for synthetic biology into the company's breakthrough gene design and assembly application. Menlo Park, CA (PRWEB) December 14,...

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Scooped by Gerd Moe-Behrens
December 14, 2011 9:57 AM
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2057 The Body Michio Kaku

Part one of the 2057 series documentary made by the discovery channel with michio kaku the renowned physicist. The body episode is a fascinating look at futu...
 
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December 14, 2011 9:40 AM
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Visions of the Future (2 of 3) The Biotech Revolution

Visions of the Future: The Biotech Revolution. 2nd part of 3 part miniseries on the BBC hosted by Michio Kaku.
 
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December 13, 2011 9:49 AM
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Introduction to synthetic biology

EMBO global exchange lecture course Apr 16-22, 2012, Buenos Aires: "Synthetic biology operates at the interface of systems biology, engineering, computer science, and classic molecular biology..."

 
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December 13, 2011 9:34 AM
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Interview Andrew Hessel (Host: Aldith Hunkar)

Produced by: http://www.fellermedia.nl Camera & crew: http://www.hoens.tv Hosted by Aldith Hunkar Andrew Hessel is a bioengineer. He likes to play with molec...
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December 12, 2011 12:51 PM
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Ed Boyden: A light switch for neurons

http://www.ted.com Ed Boyden shows how, by inserting genes for light-sensitive proteins into brain cells, he can selectively activate or de-activate specific...
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Scooped by Gerd Moe-Behrens
December 12, 2011 8:39 AM
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OEC - Synthetic Biology and Genetic Engineering

SynBio and ethics

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December 12, 2011 8:17 AM
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Berkeley hosts manufacturing brainstorm

Berkeley hosts manufacturing brainstorm | SynBioFromLeukipposInstitute | Scoop.it
Leaders from academia, government and industry gathered at UC Berkeley Monday to discuss partnership strategies to re-establish the United States as a global leader in advanced manufacturing.
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December 12, 2011 7:56 AM
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Fluorescent probes increase understanding of bacterium's electron transfer

Fluorescent probes increase understanding of bacterium's electron transfer | SynBioFromLeukipposInstitute | Scoop.it
(PhysOrg.com) -- When it comes to transporting a cell's valuable electrons, the metal-reducing microbe Shewanella oneidensis only trusts stable, mature proteins, according to scientists at Pacific Northwest National Laboratory.
 
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December 11, 2011 1:41 PM
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Amazon.com: Synthetic Biology: the technoscience and its societal consequences eBook: Markus Schmidt, Alexander Kelle, Agomoni Ganguli-Mitra, Huib de Vriend: Kindle Store

Amazon.com: Synthetic Biology: the technoscience and its societal consequences eBook: Markus Schmidt, Alexander Kelle, Agomoni Ganguli-Mitra, Huib de Vriend: Kindle Store | SynBioFromLeukipposInstitute | Scoop.it
Amazon.com: Synthetic Biology: the technoscience and its societal consequences eBook: Markus Schmidt, Alexander Kelle, Agomoni Ganguli-Mitra, Huib de Vriend: Kindle Store...
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December 11, 2011 1:36 PM
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Maximise Impact: Forget Apps, The Future is Synthetic Biology

If you're not yet totally buzzed about the future and how synthetic biology is going to change our worlds, then this video is totally worth watching. It's time to forget the shiny, the easy, and work on things that really matter.
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December 16, 2011 11:03 AM
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Gene Editing for a Better "Franken-cell" | The Promethean Cell | Learn Science at Scitable

Gene Editing for a Better "Franken-cell" | The Promethean Cell | Learn Science at Scitable | SynBioFromLeukipposInstitute | Scoop.it
I have referred to iPSCs in a previous post as 'franken-cells' and questioned whether they can offer important biological insights to the world. In this post, I'll eat my words and offer some examples where their artificiality is an asset.
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December 15, 2011 5:17 PM
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An Open Letter From Internet Engineers to the U.S. Congress | Electronic Frontier Foundation

An Open Letter From Internet Engineers to the U.S. Congress | Electronic Frontier Foundation | SynBioFromLeukipposInstitute | Scoop.it

Modern Systems Theory based science needs an open free accesiable data pool. Thus SOPA and PIPA needs to be stopped!

 
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December 14, 2011 10:17 AM
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TRADE NEWS: Yale University Adopts Multiple Agilent Platforms for Integrative Biology Research at New West Campus

TRADE NEWS: Yale University Adopts Multiple Agilent Platforms for Integrative Biology Research at New West Campus | SynBioFromLeukipposInstitute | Scoop.it

Yale encompass integrative biology, #SynBio + quantitative proteomics to gain insights into disease mechanisms

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Scooped by Gerd Moe-Behrens
December 14, 2011 9:48 AM
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Could hackers develop a 'computer virus' to infect the human mind?

Could hackers develop a 'computer virus' to infect the human mind? | SynBioFromLeukipposInstitute | Scoop.it
Silicon valley synthetic biology expert Andrew Kessel says that genetics technology is accelerating 'faster than computer technology' - and warns that hackers might use it to bend human minds.
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December 13, 2011 6:23 PM
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SBOL Developers - Synthetic Biology Open Language

SBOL Developers - Synthetic Biology Open Language | SynBioFromLeukipposInstitute | Scoop.it
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December 13, 2011 9:39 AM
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When biologists become designers of humans, then what? | SmartPlanet

When biologists become designers of humans, then what? | SmartPlanet | SynBioFromLeukipposInstitute | Scoop.it
As the tools and knowledge base for engineering genetic codes advance, the tools for designing the end product have limited usefulness.
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Scooped by Gerd Moe-Behrens
December 13, 2011 9:30 AM
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DNA Hackers: Synthetic biology weaponized virus, 0day exploit to infect your brain?

DNA Hackers: Synthetic biology weaponized virus, 0day exploit to infect your brain? | SynBioFromLeukipposInstitute | Scoop.it
Bioengineers and security futurists are warning that the day is coming when criminals and bioterrorists hunt for vulnerabilities that will give a new meaning to 0day exploits.
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December 12, 2011 12:41 PM
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Star Wars-inspired bacterium provides glimpse into life | Machines Like Us

Star Wars-inspired bacterium provides glimpse into life | Machines Like Us | SynBioFromLeukipposInstitute | Scoop.it
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Scooped by Gerd Moe-Behrens
December 12, 2011 8:18 AM
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Synthetic Biology Institute at UC Berkeley - Home

Synthetic Biology Institute at UC Berkeley - Home | SynBioFromLeukipposInstitute | Scoop.it
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December 12, 2011 7:57 AM
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Targeted Protein Degradation of Outer Membrane Decaheme Cytochrome MtrC Metal Reductase in Shewanella oneidensis MR-1 Measured Using Biarsenical Probe CrAsH-EDT2 - Biochemistry (ACS Publications)

Targeted Protein Degradation of Outer Membrane Decaheme Cytochrome MtrC Metal Reductase in Shewanella oneidensis MR-1 Measured Using Biarsenical Probe CrAsH-EDT2 - Biochemistry (ACS Publications) | SynBioFromLeukipposInstitute | Scoop.it
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December 11, 2011 1:42 PM
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grinding.be » Blog Archive » 100 Years of Synthetic Biology

RT @GrinderBot: grinding.be: 100 Years of Synthetic Biology http://t.co/KTiOopO5...
 
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December 11, 2011 1:38 PM
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Jason Silva | The Emerging Singularity

Filmmaker, aesthetic philosopher and ecstatic futurist Jason Silva -- who spoke at Singularity Summit 2011 -- articulates his call for passion and artistic s...

 
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