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Scooped by
Gilbert C FAURE
December 18, 2018 1:07 PM
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Abstract The potential of precision medicine in allergy and asthma has only started to be explored. A significant clarification in the pathophysiology of rhinitis, chronic rhinosinusitis, asthma, food allergy and drug hypersensitivity was made in the last decade. This improved understanding led to a better classification of the distinct phenotypes and to the discovery of new drugs such as biologicals, targeting phenotype‐specific mechanisms. Nevertheless, many conditions remain poorly understood such as non‐eosinophilic airway diseases or non‐IgE–mediated food allergy. Moreover, there is a need to predict the response to specific therapies and the outcome of drug and food provocations. The identification of patients at risk of progression towards severity is also an unmet need in order to establish adequate preventive or therapeutic measures. The implementation of precision medicine in the clinical practice requires the identification of phenotype‐specific markers measurable in biological matrices. To become useful, these biomarkers need to be quantifiable by reliable systems, and in samples obtained in an easy, rapid and cost‐efficient way. In the last years, significant research resources have been put in the identification of valid biomarkers for asthma and allergic diseases. This review summarizes these recent advances with focus on the biomarkers with higher clinical applicability. Highlights The implementation of precision medicine in allergic diseases requires a further clarification of disease phenotypes and endotypes allowing the identification of valid biomarkers. Many of the biomarkers of allergic diseases identified to date still require validation in larger cohorts and distinct geographical areas. Multidimensional approaches have a greater potential to identify valid biomarkers for allergic and chronic respiratory diseases. 1 INTRODUCTION Precision medicine for allergic diseases requires a deep understanding of immunopathology and phenotype heterogeneity in relation to clinically significant outcomes.1 Precision medicine could also help to limit the socio‐economic burden imposed by allergic and chronic respiratory diseases.2 According to the National Institutes of Health (NIH), precision medicine is an emerging approach for disease treatment and prevention that takes into account individual variability in genes, environment and lifestyle for each person. In this regard, asthma and allergic conditions are ideally suited, as they represent umbrella entities comprising different diseases partially sharing immune mechanisms (endotypes) and presenting similar visible properties (phenotypes), but requiring individualized approaches for a better risk prediction and the identification of treatment responders.3 The implementation of precision medicine demands measurable indicators of biological conditions usually termed biomarkers. A valid biomarker should be quantifiable in an analytical system with well‐defined performance and need to be supported by a body of evidence which sufficiently clarifies the pathological and clinical significance of the test results.4 Moreover, the identification of novel biomarkers applicable in daily practice requires clear clinical models with well‐established extreme phenotypes, allowing a better understanding of the disease progression along its severity. Another aspect influencing the clinical applicability is the biological matrix (“sample type”) where biomarkers are measured (Table 1). Appropriate matrices should be easy to obtain, store and manipulate in standardized and reproducible measuring protocols at a reasonable cost. Moreover, in most cases a single biomarker will not adequately represent the complexity of mechanisms underlying multifactorial diseases. In this regard, the generation of multidimensional biomarker panels displays a greater potential to identify valid markers.5 The ideal biomarker Supported by a body of evidence clarifying its biological significance Quantifiable in a cost‐efficient analytical system with well‐defined performance Detectable in a biological matrix obtained in an easy, rapid and cost‐efficient way The research efforts in asthma and allergic diseases during the last decades have focused on the identification of biomarkers applicable in clinical practice. Although several markers of allergic inflammation (e.g, IgE, eosinophilia, fractional exhaled nitric oxide [FENO]) have been described, their utility in diagnosis, prognosis and therapy is still controversial.6-8 Different types of molecules (genes, metabolites, etc.) have been also proposed as biomarkers for allergic and chronic respiratory conditions. Some of them display good analytical properties, but overall, they are insufficiently robust to be extrapolated to clinical practice. This fact partially arises from a paucity of clinical models for allergic diseases, which clearly constitutes a limiting factor in the search for biomarkers. This review will summarize the biomarkers identified to date for allergic and chronic respiratory conditions, with special focus on those with higher clinical applicability. 2 NEW METHODS TO IDENTIFY BIOMARKERS: THE OMICS The different omics characterize and quantify biological molecules, which share a common feature and which provide information about the structure and function of organisms. Omics are significantly contributing to the definition of disease endotypes and phenotypes and to the identification of therapeutic targets. Recent technological advances have pushed the omics field forward by allowing higher throughputs, improving detection limits and providing software tools to analyse and visualize the data. Genomics, transcriptomics and epigenetics have been used to identify genes, RNA sub‐types and DNA modifications, respectively. Nevertheless, the validation of these observations requires the investigation of their functional consequences (e.g, the effect in transcription or splicing variants or in the functionality of proteins). Only this step permits valid conclusions for the underlying mechanisms of disease phenotypes (Figure 1). Metabolomics investigates the nature and concentration of the metabolites generated in living systems and is among the most recent approaches applied to allergy research. Metabolomics displays a high degree of versatility, as it is applicable to a great variety of matrices, whose nature can be tailored to the disease of interest.4, 7 In chronic respiratory diseases, the metabolic analysis of exhaled breath condensate seems a promising matrix for biomarker identification. Other approaches which could help phenotype chronic airway conditions include electronic nose (eNose) or nuclear magnetic resonance–based metabolomics.7 Nevertheless, the lack of standardized procedures for breath sampling, the effect of pH on some metabolites and the low concentrations are well‐established limiting factors. Individual omics display both strengths and weaknesses which overall define the validity and robustness of the results. The development of multi‐omics and multi‐matrix platforms in integrated approaches will probably provide a more holistic picture of biological situations, including allergic and chronic respiratory diseases. Nevertheless, the implementation of these advances in clinical practice requires the identification of biomarkers measurable in biological fluids obtained in an easy, rapid and cost‐efficient way. 3 UPPER AND LOWER AIRWAY DISEASES 3.1 Rhinitis Chronic rhinitis is generally divided into allergic rhinitis (AR) and non‐allergic rhinitis (NAR).9 The NAR category comprises a heterogeneous group of diseases mediated by immune or neurogenic mechanisms.10 Conversely, AR is a relatively homogeneous entity arising from IgE‐mediated inflammation.11 Local allergic rhinitis (LAR) is a disease phenotype not fitting into the AR‐NAR dichotomy.12 The skin prick test (SPT) and/or serum allergen–specific (s)IgE and the nasal allergen challenge (NAC) positively identify AR patients. Subjects with LAR are defined by a positive NAC with negative SPT and serum sIgE, whereas NAR patients test negative for the three biomarkers. Several inflammatory cells and mediators may also serve as diagnostic biomarkers for AR. Eosinophils, IL‐5, IL‐6, IL‐13 and macrophage inflammatory protein (MIP)‐1β increase in the nasal lavage of AR patients following NAC,13 while elevated nasal endothelin (ET)‐1 and CCL17 at baseline discriminate AR from NAR individuals.14 Compared to healthy controls, subjects with house dust mite (HDM)–induced AR have increased circulating group 2 innate lymphoid cells (ILC2), which also correlate with serum IL‐13 and symptom scores.15 Allergen immunotherapy (AIT) is an effective treatment for AR16 and LAR17, 18 but involves considerable time and cost. Biomarkers assisting the selection of patients most likely to respond to AIT have recently been summarized.16 A proportion of sIgE to total IgE >16.2% predicted AIT success with 97.2% sensitivity and 88.1% specificity.19 In children, low serum osteopontin identifies responders to sublingual immunotherapy.20 Serum osteopontin and basophil reactivity increase after NAC21 and diminish following successful AIT.16 Moreover, subcutaneous immunotherapy with HDM armed peripheral T regulatory cells with the ability to inhibit Th2 and Th9 proliferation.22 3.2 Chronic rhinosinusitis Chronic rhinosinusitis (CRS) is defined by nasal and sinus mucosal inflammation. Phenotyping of CRS is typically based on the presence (CRSwNP) or absence (CRSsNP) of nasal polyps on endoscopy or CT scan, whereas examination of nasal samples facilitates the endotyping (Figure 2). In Caucasian populations, nasal polyps generally show an eosinophilic infiltrate, whereas fewer than 50% of Asian patients display eosinophilic polyps.23, 24 One study identified ten CRS clusters, of which six exhibited a type 2 inflammatory profile with raised IL‐5 and eosinophilia. Type 2 clusters displayed a higher risk of nasal polyps and asthma.25 The CRSwNP phenotype has been also associated with increased ILC2 at both the tissue level and peripheral blood.26, 27 Several matrices have been used to predict CRS prognosis. Blood and tissue eosinophilia correlates with severity as measured by endoscopy and CT scan28 and can predict recurrence following endoscopic sinus surgery.23 In addition, a small study observed that programmed cell death‐1 (PD‐1) mRNA expression in nasal polyp tissue correlated with disease severity on CT scan,29 while tissue gene expression of the eosinophil marker—Charcot‐Leyden crystal protein—was associated with higher olfactory impairment.30 The level of IL‐5 and P‐glycoprotein in nasal secretions helped to predict the olfactory and the CT scan scores, respectively.31 Nasal nitric oxide (nNO) inversely correlated with CT scan‐graded severity and increased after sinus surgery.32 3.3 Asthma Asthma phenotypes are classified into those displaying dominant type 2 inflammation, and those without significant type 2 inflammation,33 with each group comprising a number of different diseases (Figure 3). Several biomarkers measurable in different matrices have been described for these asthma phenotypes. The relevance of asthma endotyping is perfectly illustrated by the case of the anti‐IL‐5 monoclonal antibody (mAb) mepolizumab whose initial lacklustre performance in unclassified asthma34 was followed by excellent outcomes when administered to patients with eosinophilic asthma.35 In any individual, the disease expression may be driven by complex endotypes with numerous mechanistic pathways3; therefore, multidimensional biomarker assessment may be required. Unsupervised statistical analyses examining various blood inflammatory mediators identified unique clusters with different clinical and pathological features. Cluster analysis using sputum mediators at exacerbation also identified distinct biologic clusters with differences in host microbiome. The subsequent paragraphs describe individual biomarkers according to their biological matrices in more detail. 3.4 Diagnostic biomarkers 3.4.1 Blood cells Peripheral blood eosinophilia and neutrophilia in asthma have been associated with different clinical characteristics, with neutrophilia indicating increased sputum production.36 In asthma, neutrophilia is also more prevalent among patients with a smoking history and persistent airflow limitation compared to non‐smoking asthma patients (4.5 × 109 vs 3.6 × 109 cells/L),37 suggesting that neutrophilia may differentiate between patients with asthma alone from those with features of asthma‐chronic obstructive pulmonary disease (COPD) overlap (ACO) syndrome. Several genes regulating immune cells such as B lymphocytes, T lymphocytes and granulocytes were up‐ or down‐regulated in severe asthma compared to healthy controls.38 In a paediatric asthma cohort, the expression of five selected genes on CD4 lymphocytes (SRM, HDAC2, SLC33A1, P2RY10 and ADD3) predicted the atopic status with 100% sensitivity and 81.3% specificity,39 while in another paediatric study, a fourteen‐gene signature (MCEMP1, AQP9, PGLYRP1, S100P, RNASE2, OLFM4, CAMP, CEACAM8, LCN2, MPO, DEFA4, ELANE, BPI, DEFA1B, CTSG, HBD, ALAS2, RPS4Y2 and RPS4Y1) was unique to a neutrophilic phenotypic cluster.40 In a recent pilot study, circulating blood microRNA profile (expressed as miRNA ratios) showed promise in differentiating allergic asthma from healthy controls.41 Lipidomic profile and gene expression after low molecular weight hyaluronic acid stimulation of peripheral blood mononuclear cells were also shown to be different in severe asthma compared to mild asthma and healthy controls.42 Peripheral differential cell counts can also serve as surrogate markers of airway inflammation. In a meta‐analysis of 14 studies, the ability of blood eosinophils to predict airway eosinophilia showed an area under the curve (AUC) of 0.78.43 Enumeration of peripheral ILC2 has a similar utility for predicting sputum eosinophilia.44 Conversely, blood neutrophilia is less indicative of sputum neutrophilia, with an AUC of only 0.6.45 The ex vivo response of blood neutrophils and eosinophils to stimulation with N‐formyl‐methionyl‐leucyl‐phenylalanine (fMLP), in combination with relevant clinical parameters, is also able to predict sputum eosinophilia.46 3.4.2 Serum mediators The chitinase‐like protein YKL‐40 distinguished asthma from COPD and healthy controls.47 Neutrophil expression of Siglec‐9 is increased in patients with COPD and may have future potential to diagnose asthma.48 Serum (soluble‐cleaved) urokinase plasminogen–activated receptor (scuPAR) was found to be higher in severe, non‐atopic asthma in a single study49 and requires confirmation in further studies. Blood mediators can also predict airway inflammation. Overall, serum periostin moderately correlated with sputum eosinophilia.50, 51 Eosinophilic cationic protein (ECP) is more predictive of sputum eosinophilia than serum IgE,39 whereas C‐reactive protein (CRP) is weakly associated with sputum neutrophilia.52 3.4.3 Sputum cells and mediators Sputum quantitative cell count is a reference standard for airway inflammation in asthma. Four inflammatory phenotypes have been described—eosinophilic, neutrophilic, mixed granulocytic and paucigranulocytic. The neutrophilic subtype has been associated with the obese female asthma non‐type 2 phenotype.52 The Unbiased Biomarkers for the Prediction of Respiratory Disease Outcomes (UBIOPRED) study is a multicentre prospective cohort study recruiting patients with severe asthma in various European countries. Sputum analysis of the UBIOPRED cohort identified 3 transcriptome‐associated clusters (gene clusters), corresponding to eosinophilic, neutrophilic and paucigranulocytic phenotypes, respectively.53 A six‐gene signature (CLC, CPA3, DNASE1L3, IL1B, ALPL and CXCR2) can differentiate asthma patients from controls and distinguish between eosinophilic from neutrophilic asthma.54 This method has a practical advantage over sputum differential cell counts, as frozen samples can be batched for processing. Neutrophil myeloperoxidase in sputum has the potential to differentiate ACO from asthma.55 Specific microRNAs can discriminate neutrophilic from eosinophilic asthma.56 Sputum eosinophil peroxidase (EPX) correlates with sputum eosinophilia,57 as does nasal and pharyngeal EPX.58 Importantly, nasal sampling may be particularly useful for patients in whom sputum induction is unsafe or not possible. 3.4.4 Cellular bronchial samples Patients in the UBIOPRED cohort could be divided into four groups based on the expression of nine gene sets in bronchial cells, each with mixed inflammatory patterns including one with concomitant Th2 and Th17 markers.53 Interestingly, a different study found that Th2 and Th17 gene expression signatures were mutually exclusive in asthmatic airway tissue.59 The authors suggested that suppression of Th2 activity by corticosteroids may accentuate Th17 activity. Different gene signatures for Th2 and Th17 activities were used in the two studies, possibly limiting direct comparisons. The interplay between Th2 and Th17 cells is also likely to be complex, and the exact relationship between the two is still uncertain.60 3.4.5 Exhaled breath The FENO displays an AUC of 0.8 for asthma diagnosis.2 Of note, very high or low cut‐offs for FENO can, respectively, rule‐in or rule‐out asthma.27 Conversely, FENO has limited utility to predict sputum eosinophilia,43 as it is confounded by corticosteroid treatment, atopy and smoking status. Volatile organic compounds (VOCs) in exhaled breath can be readily measured using eNose devices. Building on previous work which discriminates between COPD and asthma, eNose has identified label‐free clinical and inflammatory clusters among asthma and COPD patients.61 VOCs and other metabolites in exhaled breath can also differentiate asthma from healthy controls in adults and children.62-65 In a paediatric study, metabolomic analysis using nuclear magnetic resonance (NMR) of exhaled breath condensate identified three clusters with different inflammatory profiles based on global spectral patterns of NMR.66 3.4.6 Urine Urine metabolite analysis can accurately discriminate between asthma and COPD67 and also correlates with FENO and blood eosinophilia.68 3.5 Prognostic biomarkers 3.5.1 Blood cells Raised blood eosinophils strongly predict the risk of asthma exacerbations in both adults and children.69, 70 Blood eosinophilia also predicts longitudinal lung function decline, irrespective of smoking status.71 Blood neutrophilia is linked with airway infections in asthma11 as well as poor symptom control and increased exacerbations.72 Circulating blood fibrocytes correlate with asthma severity.73 3.5.2 Serum mediators The stability of serum periostin over disease progression facilitates its use as a biomarker.74 Elevated levels are associated with fixed and more severe airflow obstruction75, 76 and greater longitudinal lung function decline.77 Total serum IgE in children is associated with atopy, airway hyperresponsiveness (AHR) and bronchial wall thickening in CT scan.69 In both adults and children, YKL‐40 level correlates with severe asthma and poor lung function.78, 79 The expression of ten selected microRNAs (HS_108.1, HS_112, HS_182.1, HS_240, HS_261.1, HS_3, HS_55.1, HS_91.1, hsa‐miR‐604 and hsa‐miR‐638) was higher in children with severe asthma.80 3.5.3 Sputum cells and mediators Sputum neutrophilia and ILC2 27 are associated with asthma severity.81, 82 Changes in sputum eosinophilia reflect fluctuations in clinical asthma control.83 Human tumour necrosis factor–like weak inducer of apoptosis (TWEAK) is an inflammatory mediator whose level in sputum correlated with higher severity, poor symptom control and decreased lung function in children with non‐eosinophilic asthma.84 3.5.4 Cellular bronchial samples Bronchial neutrophilia is present in severe (compared to non‐severe) asthma, independent of oral corticosteroid (OCS) intake.85 Gene signatures analysed in endobronchial brushing and biopsy specimens predicted persistent airflow limitation in the UBIOPRED cohort.86 In bronchoalveolar lavage samples, elevated CD4+ cells expressing both IL‐4 and IL‐17 predicted greater asthma severity.69, 87 3.5.5 Exhaled breath In both children and adults, FENO correlates with greater AHR, airway obstruction and exacerbations.69, 88 Patients with FENO >45 ppb are at greater risk for suffering >2 asthma exacerbations/year.89 Electronic nose‐measured VOCs predicted the loss of asthma control upon withdrawal of inhaled corticosteroids (ICS).90 Reactive oxygen species (ROS) can also be detected in exhaled breath condensates of patients with asthma and has been shown to be suppressed by anti‐inflammatory agents.91 3.5.6 Functional imaging of lungs Functional imaging with hyperpolarized gas magnetic resonance of the lung can predict asthma outcomes; persistent ventilation defects were associated with poorer asthma control.92 Greater ventilation defects are also observed in patients with uncontrolled eosinophilic inflammation.93 3.6 Biomarkers for therapeutic response prediction and measurement 3.6.1 Blood cells Blood eosinophilia identifies asthma patients responding to therapies targeting type 2 inflammation. The post hoc analyses of randomized controlled trials with the anti‐IgE mAb omalizumab identified blood eosinophilia (≥300 cells/μL) as a predictor of greater response.94, 95 Nevertheless, this finding was not reproduced in a real‐life study.96 There is a direct correlation between blood eosinophilia and the response to mepolizumab,97 the anti‐IL‐5 receptor mAb benralizumab98 and the anti‐IL‐4 receptor mAb dupilumab.99 Blood eosinophilia may also predict and monitor the response to corticosteroids. Atopic children with eosinophilia ≥300 cells/μL respond better to ICS.100 A decrease in peripheral eosinophilia is observed with the up‐dosing of ICS,101 while titration of OCS to maintain blood eosinophilia <200 cells/μL improved asthma control.102 3.6.2 Serum mediators Elevated serum periostin predicts the response to omalizumab.75, 103 Interestingly, total serum IgE does not predict the response to omalizumab, despite this molecule being not only the drug target, but also the basis for its dose calculation.104 On the other hand, a reduction in serum‐free IgE after 16‐32 weeks on omalizumab is associated with a decrease in exacerbations over two years.81 3.6.3 Sputum Sputum eosinophilia ≥3% predicts response to corticosteroids105 and mepolizumab.35 Sputum eosinophilia as a guide for ICS therapy reduced exacerbations with no associated increase in the total ICS dose.106, 107 3.6.4 Exhaled breath In patients with symptoms suggestive of AHR, elevated FENO predicts response to ICS.108 A systematic review concluded that using FENO to guide ICS therapy in adults reduced the mild but not the severe exacerbations.109 Among children, FENO also showed unclear benefits on asthma outcomes.110 A FENO level >19.5 ppb also correlated with response to omalizumab.75 3.6.5 Urine Urine bromotyrosine correlates with corticosteroid responsiveness, and the predictive accuracy further improves when combined with high FENO levels.94 Despite the previous enumeration being made in a matrix‐related fashion, the complexity of most asthma phenotypes will require multidimensional approaches to identify valid biomarkers (Table 2). This aspect is exemplified by the greatest benefit from dupilumab being observed in asthma patients exhibiting both elevated peripheral eosinophilia and FENO.99 Diagnosis Prognosis Response prediction and monitoring Blood cells Distinguish asthma from COPD Blood neutrophil Distinguish asthma from healthy controls Gene expression Inflammatory phenotyping Blood eosinophils Blood neutrophils Responsiveness of blood neutrophils and eosinophils to fMLF Exacerbations Eosinophils Neutrophils Symptoms Neutrophils Lung function Eosinophils Asthma severity Fibrocytes Predict response to anti‐IL‐5 Eosinophils Predict response to ICS Eosinophils Monitor response to corticosteroids Eosinophils Blood mediators Distinguish asthma from COPD YKL‐40 Siglec‐9 Determine atopy status scuPAR Inflammatory phenotyping ECP CRP Lung function Periostin YKL‐40 Airway remodelling IgE Asthma severity IgE MicroRNA YKL‐40 Predict response to omalizumab Periostin Reduction in serum‐free IgE Sputum cells Inflammatory phenotyping Quantitative cell count Gene signature Lung function Neutrophils Asthma severity ILC2 Loss of asthma control Eosinophils Predict response to mepolizumab Eosinophils Predict response to corticosteroids Eosinophils Guide ICS titration Eosinophils Sputum mediators Distinguish asthma from COPD MPO Inflammatory phenotyping MicroRNA Sputum/nasal/pharyngeal EPX Asthma severity TWEAK Bronchial tissue Inflammatory phenotyping Gene expression Lung function Gene signatures Asthma severity Neutrophils Exhaled breath Asthma diagnosis FENO VOC Metabolites Inflammatory phenotyping eNose Exacerbations FENO Lung function FENO Loss of asthma control eNose Predict response to ICS FENO Guide ICS therapy FENO (in adults) Urine Distinguish asthma from COPD Metabolites Inflammatory phenotyping Urine metabolites Predict response to corticosteroids Urine bromotyrosine COPD, chronic obstructive pulmonary disease; CRP, C‐reactive protein; ECP, eosinophilic cationic protein; eNose, electronic Nose; EPX, eosinophil peroxidase; FENO, fractional exhaled nitric oxide; fMLF, N‐formyl‐methionyl‐leucyl‐phenylalanine; ICS, inhaled corticosteroid; IgE, immunoglobulin E; IL‐5, interleukin‐5; ILC2, group 2 innate lymphoid cell; LTE4, leukotriene 4; MPO, myeloperoxidase; NERD, aspirin‐exacerbated respiratory disease; scuPAR, serum soluble‐cleaved form of the urokinase plasminogen–activated receptor; Siglec‐9, sialic acid–binding immunoglobulin‐type lectins‐9; TWEAK, tumour necrosis factor–like weak inducer of apoptosis; VOC, volatile organic compounds. 4 FOOD ALLERGY AND ANAPHYLAXIS The food allergy (FA) phenotypes differ on their IgE dependence and prognosis (Figure 4).111 Given this heterogeneity, the search for FA biomarkers has gained significant attention.112 4.1 IgE‐mediated food allergy The identification of children at risk of developing FA might help establish preventive strategies.112 The balance between type 2 and type 1 chemokines in cord blood influenced the sensitization to food allergens at the age of 3 years in children from Taiwan.113 Atopic individuals often display skin prick test (SPT) positivity to foods they tolerate.112 Indoleamine 2,3‐dioxygenase (IDO) is a tryptophan‐catabolizing enzyme expressed by antigen‐presenting cells.114 A high IDO activity was associated with unresponsiveness to food allergens in sensitized children from Turkey.114 Molecular allergology is a useful tool to identify clinically relevant IgE sensitization.2, 112 Specific (s)IgE to the storage proteins Cor a 14 from hazelnut or Ana o 1, 2 or 3 from cashew, correlated with clinically relevant sensitization in children from Denmark115 and the Netherlands,116 respectively. These observations might facilitate the management of patients with FA by limiting the number of oral food challenges (OFC) necessary for diagnosis.64, 112 Interestingly, a score based on the value of sIgE to Ana o 3, the SPT wheal size and the gender of the patient was proposed to predict the outcome of cashew OFC in Dutch patients.117 Basophil activation test (BAT) might also correlate with the OFC outcome in food‐dependent NSAID‐induced anaphylaxis.118 Anaphylaxis is the most severe phenotype of IgE‐mediated hypersensitivity, and the increase in serum tryptase is a helpful biomarker in most cases.119 In Canadian children, milk was the food most likely to increase serum tryptase levels.119 Interestingly, the combination of the serum levels of apolipoprotein A1 and the prostaglandin D2 metabolite 9α,11β‐PGF2, displayed a good diagnostic performance for food‐induced anaphylaxis in German patients.120 Oral immunotherapy (OIT) is a promising tool for persistent forms of IgE‐mediated FA.111, 121-123 In anaphylactic children from the United States, successful milkOIT induced the increase in peripheral invariant natural killer T (iNKT) cells and skewed milk‐stimulated iNKT cells from a type 2 to a type 1 profile.124 Furthermore, successful OIT reduced blood eosinophils and increased several mediators functionally related to type 1 immunity (adipokines, leptin or resistin) in milk‐allergic children from Finland.125 A higher baseline sIgA and a rapid increase in sIgG1 after OIT initiation identified good responder egg‐allergic children from Japan.126 The adverse reactions (AdR) during OIT limit its use in the clinics.123 In children undergoing peanutOIT, the presence of allergic rhinitis and the SPT wheal size were associated with systemic and gastrointestinal AdR.127 Adjuvant therapy with omalizumab might reduce AdR during OIT,123 and the combination of basophil reactivity and sIgE/total IgE ratio at baseline could identify patients more likely to benefit from omalizumab during milkOIT.128 Beyond the oral route, other administration routes are under investigation for severe FA.123 Sublingual immunotherapy with Pru p 3, the lipid transfer protein from peach, induced anti‐inflammatory PDL‐1+ dendritic cells and IL‐10+ T regulatory cells in responder patients from Spain.129, 130 4.2 Other types of food allergy The diagnosis of eosinophilic esophagitis requires the demonstration of >15 eosinophils/high‐power field in the oesophagus of individuals with suggestive symptoms.131 Oesophageal eosinophilia correlated with male gender and the number of positive food sIgE tests in American children.132 This observation might help to limit the number of endoscopies required for diagnosis.131 The management of food protein‐induced enterocolitis syndrome (FPIE) patients involves consecutive OFCs to asses for disease resolution.133 In Japanese children with FPIES, the OFCs induced the activation of intestinal and peripheral eosinophils.134 Interestingly, the peripheral level of C‐reactive protein and of eosinophilia correlated with a poor and good prognosis, respectively, in Japanese patients with FPIES.135 Despite the progress made in recent years, most biomarkers remain to be validated in larger populations and distinct geographical areas. Moreover, growing evidence suggests that airway allergy influences many of the parameters identified as FA biomarkers.136, 137 In this regard, the clarification of atopic phenotypes and their relationship with FA will improve the interpretation of biomarkers.68, 138 5 DRUG HYPERSENSITIVITY A summary of the different drug hypersensitivity phenotypes can be seen in Figure 5. 5.1 Cross‐intolerance to NSAIDs Non‐steroidal anti‐inflammatory drugs (NSAIDs) are the most common triggers of drug hypersensitivity reactions, and in most cases, these reactions are not mediated by immunological mechanisms.139 In non‐selective or cross‐intolerant reactions, NSAIDs from different groups provoke skin or respiratory symptoms.140 In these cases, the reaction‐inducing potential does not rely on the chemical structure of the drug, but on its COX‐1 inhibitory activity.140 Aspirin‐ or NSAID‐exacerbated respiratory disease (AERD and NERD, respectively) is the most studied phenotype of cross‐intolerance. This entity is defined by the onset of respiratory symptoms upon intake of NSAIDs and is related to a dysregulation of arachidonic acid (AA) metabolism with overproduction of leukotrienes (LT) and prostaglandins (PG).141 Many NERD subjects have concomitant CRS and asthma.141 In a Korean study, NERD patients were divided into four sub‐phenotypes based on the presence of CRS, urticaria and atopy.142 Interestingly, significant differences existed in asthma severity, total serum IgE, sputum and peripheral eosinophilia, and urinary LTE4 (uLTE4).142 In American patients, uLTE4 helped to identify aspirin sensitivity in patients with different nasal inflammatory conditions.143 A recent meta‐analysis reported that the sensitivity and specificity of uLTE4 for identifying aspirin sensitivity in asthma ranged from 0.55 to 0.81 and from 0.77 to 0.82, respectively, depending on the detection method.144 Serum LTE4 in combination with LTE4/PGF2α ratio might help to detect NERD among other asthma phenotypes.145 Aspirin provocation increased 8‐iso‐PGE2 in the exhaled breath condensate of NERD patients and correlated with uLTE4.146 Platelet activation was also associated with overproduction of AA metabolites and to a reduced lung function in NERD patients.147 Other biomarkers beyond AA metabolites have been related to NERD. The serum sphingosine‐1‐phosphate was higher in NERD patients than in other asthmatics.148 American patients with NERD displayed higher activation of mast cells, basophils and platelets measured in nasal microparticles than other CRS individuals.149 Overall, these biomarkers might facilitate the diagnosis of NSAID hypersensitivity by decreasing the need for drug provocations. Some cross‐intolerance phenotypes resolve over time,150 and these biomarkers might help determine the most adequate timing to test for aspirin tolerance. 5.2 Immune‐mediated reactions These conditions can be divided into immediate and non‐immediate reactions arising from IgE‐ and T cell–mediated mechanisms, respectively (Figure 5).112 5.3 Immediate reactions Betalactams (BL) and fluoroquinolones (FQ) are the most common drugs involved in immediate reactions.139 5.3.1 Betalactams Skin testing displays a diagnostic sensitivity of up to 70%.151 Available in vitro tests include immunoassays to quantify serum BL‐sIgE, including the commercial ImmunoCAP© (Thermo‐Fisher, Uppsala, Sweden).151 Its sensitivity shows a high variability (0%‐50%),152 depending on the reaction severity and the time gap at the moment of measurement.153 Moreover, ImmunoCAP© can induce false‐positive results when testing for Penicillin‐V.154 Increased serum tryptase during the acute phase of reactions can confirm mast cell activation 112 and correlates with the severity.155 The sensitivity of BAT for BL allergy ranges from 22% to 55% with a specificity of up to 96%.156, 157 5.3.2 Fluoroquinolones Skin testing is not useful for the diagnosis of FQ allergy,158 and there are no available immunoassays. The CD63‐based BAT displayed 83.3% sensitivity and 88.9% specificity for ciprofloxacin allergy.159 Surprisingly, CD203c outperforms CD63 as BAT‐activation marker for moxifloxacin allergy, yet its sensitivity was low (36.4%).159, 160 These data question the role of basophils in moxifloxacin allergy, but identify BAT as a promising tool for ciprofloxacin allergy. 5.4 Non‐immediate reactions Patch testing and intradermal test with delayed reading are useful in vivo biomarkers. The sensitivity of the in vitro lymphocyte transformation test (LTT) is lower than that of BAT for immediate reactions.63, 155 A combination of granzyme B and granulysin expression in blood cells can detect lymphocyte activation in the setting of severe cutaneous reactions like Stevens‐Johnson syndrome.161 The screening for HLAB*57:01 before abacavir prescription is recommended by regulatory agencies,162 as it showed 100% of negative predictive value for immunologically confirmed abacavir hypersensitivity.163 The screening for HLAB*15:02 is also recommended before carbamazepine treatment in patients at high risk (Han Chinese, Vietnamese, Cambodians, etc.).164, 165 6 CONCLUSIONS The potential of precision medicine in the fields of allergy and chronic respiratory diseases has only started to be explored. A better definition of disease phenotypes and endotypes based on treatable traits and other clinically significant aspects is a prerequisite to progress in individualized therapies. In the last decade, we have seen an improvement in the definition of allergic respiratory disease, and we have gained insights into other eosinophilic phenotypes of rhinitis, CRS and asthma. This knowledge has translated into a significant broadening of therapeutic options, including (but not limited to) new biologicals. Because precision medicine needs to be performed in a cost‐efficient way, there is a need to identify responder patients to these new drugs. On the other hand, the available therapies for NAR and non‐eosinophilic CRS and asthma are much more limited, reflecting the important knowledge gaps in the pathophysiology of those phenotypes. Similarly, there is a need to progress in the definition of EoE and FPIES in order to improve the clinical management of the patients. The clarification of the disease mechanisms behind IgE‐mediated food allergy and drug hypersensitivity will help identify patients at risk of developing allergic reactions, limit the number of required provocations and establish preventive strategies. Nevertheless, the clarification of disease phenotypes per se does not guarantee the implementation of precision medicine in the clinical practice, as this step requires the detection of valid biomarkers. This search will be a long and resource‐consuming path requiring large population cohorts. Among the different disciplines applied to biomarker identification, metabolomics appears as a promising tool, yet growing evidence indicates that valid biomarkers will be detected by multidimensional strategies. Valid biomarkers do not only need to accurately reflect the phenotype‐specific disease mechanisms, but also to be quantifiable in a rapid, easy and cost‐efficient way. Only under these premises, the research in biomarker identification will be able to impact the clinical practice and translate into an improved diagnosis, management, and treatment of patients with allergic and chronic respiratory diseases. ACKNOWLEDGMENTS The present work has been supported by the Institute of Health “Carlos III” of the Spanish Ministry of Economy and Competitiveness (grants cofunded by the European Regional Development Fund (ERDF): thematic network and cooperative research centres ARADyAL RD16/0006/0001 and RD16/0006/0015, and research projects PI15/02256, PI16/00249, PI17/01318. This article has been also supported by research grants provided by the Regional Ministry of Health of Andalusia: PI‐0346‐2016 and PC‐0278‐2017. I Eguiluz‐Gracia holds a Rio Hortega research contract (CM17/00140) of the Institute of Health “Carlos III,” Spanish Ministry of Economy and Competitiveness (cofounded by the European Social Fund, ESF). CONFLICT OF INTEREST None of the authors have any conflict of interest in relation to this article. REFERENCES
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Scooped by
Gilbert C FAURE
December 4, 2018 4:09 AM
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Abstract All body surfaces are exposed to a wide variety of microbes, which significantly influence immune reactivity within the host. This review provides an update on some of the critical novel findings that have been published on the influence of the microbiome on atopic dermatitis, food allergy and asthma. Microbial dysbiosis has consistently been observed in the skin, gut and lungs of patients with atopic dermatitis, food allergy and asthma, respectively, and the role of specific microbes in allergic disorders is being intensively investigated. However, many of these discoveries have yet to be translated into routine clinical practice. Abbreviations AAI allergic airway inflammation AD atopic dermatitis AHR airway hyper‐responsiveness AMP antimicrobial peptides COPD chronic obstructive pulmonary disease CRS chronic rhinosinusitis GCS glucocorticoids HDM house dust mite HMOs human milk oligosaccharides ICSs inhaled corticosteroids LABAs long‐acting β2 adrenergic receptor agonists OIT oral immunotherapy PARs protease‐activated receptors PSMs phenol‐soluble modulins RSV respiratory syncytial virus SCFAs short‐chain fatty acids TLR Toll‐like receptor 1 INTRODUCTION An enormous variety of microbes colonize the skin and mucosal body surfaces. These microbes are organized within complex community structures, utilizing nutrients from other microbes, host secretions and the diet. The microbiome is defined as the sum of these microbes, their genomic elements and interactions in a given ecological niche. In addition to bacteria, viruses are also considered to be an important component of the microbiome (virome). The composition of the microbiome is dependent on the specific body site examined, resulting in a series of unique habitats within and between individuals that can change substantially over time.1 This presents significant challenges to the local immune system, which should tolerate the presence of these microbes to avoid damaging host tissue while retaining the ability to respond appropriately to pathogens. The mechanisms that mediate host‐microbe communication are highly sophisticated and need to be constantly coordinated.2 Indeed, disrupted communication between the microbiome and the host due to altered microbiome composition and/or metabolism is thought to negatively influence immune homeostatic networks and may play a role in immune hypersensitivity to environmental exposures, such as allergens.3-5 For several years, epidemiological studies have suggested associations between the migration from traditional farming to urban environments, increase in processed food intake, lack of contact with animals and excessive hygiene practices with the increased incidence of asthma, atopic dermatitis and food allergy. However, it is only relatively recently that the importance of the gut, lung and skin microbiomes in regulation of immune tolerance and its aberrations in a variety of human diseases including allergy and asthma has been recognized.6, 7 In particular, early‐life events such as mode of delivery, breastfeeding, mother's diet and health status, antibiotics and other drug usage in pregnancy and early childhood, early‐life environment (ie, siblings, pets at home, proximity to farm animals and green areas) significantly influence the timing of bacterial colonization and establishment, which modify the risk of developing allergies and asthma, as summarized in Figure 1.8-17 In this review, we will highlight some of the recent advances in our knowledge regarding the influence of the microbiome on immune reactivity in the skin, gut and lungs of patients with atopic dermatitis, food allergy and asthma. In addition, we will discuss the potential translation and challenges associated with microbial‐based therapies in patients with these allergic disorders. 2 MICROBIOME IN ATOPIC DERMATITIS The skin microbiome is comprised of bacteria, fungi, viruses and archaeal communities, with bacteria being the most widely studied.18 The skin microbiome is influenced by age, gender, ethnicity, climate, UV exposure and lifestyle factors.19 16S ribosomal RNA (rRNA) sequencing has demonstrated that significantly diverse bacterial phyla exist on healthy skin with site‐specific differences in composition. This is primarily driven by the physiology of a skin niche. Propionibacterium species are predominantly found in sebaceous sites, with Corynebacterium and Staphylococcus species occurring in moist microenvironments. Malassezia represents the predominant fungal flora on human skin.20 Figure 2 illustrates the interactions between the skin microbiome and host cells. Atopic dermatitis (AD) is characterized by epidermal barrier dysfunction resulting from a synergistic decrease in epidermal barrier structural proteins, alteration in lipid composition and skin pH, activation of local and systemic inflammatory responses and decrease in skin microbiome diversity.19 Staphylococcus aureus overgrowth is consistently linked with AD pathogenesis and correlates with disease severity and eczematous flares.1, 21 High IL‐4 and IL‐13 levels within AD skin can deplete keratinocyte‐produced antimicrobial peptides (AMPs), cathelicidin LL‐37, human beta defensin hBD‐2 and hBD‐3, necessary for controlling pathogenic organisms.22 Defective TLR‐2 expression in Langerhans cells of AD skin has also been observed, which may contribute to the impairment in effective immune recognition and clearance of pathogenic bacteria such as S. aureus.23 Epidermal lipid composition strongly correlates with bacterial diversity and composition at typical sites for AD lesions. For example, S. aureus dominance was associated with elevated levels of ceramide AS.21 Staphylococcus aureus overgrowth with concomitant decline in Staphylococcus epidermidis is a general feature of AD and is not restricted to eczematous lesions.19, 21 Staphylococcus aureus colonization is evident in 90% of AD cases,24 associates with AD severity and increased allergen sensitization.25 Intervention studies with antimicrobials targeting S. aureus can reduce AD severity. Restoration of the epithelial barrier with anti‐inflammatory and emollient use is able to increase microbial diversity of lesional skin.1, 24 Patients with severe AD can be colonized with a single S. aureus strain, which persists even post‐eczematous flare albeit at a lower relative abundance. In contrast, S. epidermidis strains were more heterogeneous. Interestingly, patients with more severe AD were colonized with methicillin‐sensitive staphylococci, whereas less severe AD was more frequently associated with methicillin‐resistant strains. This observation may have significant treatment implications, particularly when methicillin‐sensitive S. aureus and methicillin‐resistant S. epidermidis strains are present.26 In a recent study, the skin microbiome of infants with AD showed a consistent absence of S. aureus sequences at multiple time points on lesional skin contrary to reported finding in patients with established AD. The most prevalent species were S. epidermidis and S. cohnii. However, those who developed AD at 12 months had significantly lower levels of these commensal staphylococci detectable at 2 months of age.27 This study suggests that S. aureus colonization may not always predate clinical AD and highlights the need for longitudinal studies to investigate the transition to microbial dysbiosis in AD. Commensal S. epidermidis strains can also increase during disease flares.24 Coagulase‐negative staphylococci (CoNS), which include S. epidermidis, S. hominis and S. lugdunensis, can secrete antimicrobials that limit S. aureus overgrowth and biofilm formation.1, 28 In addition, S. epidermidis activates TLR2, thereby promoting tight junction protein expression and inducing keratinocyte‐derived antimicrobial peptide secretion. Early occupation of the neonatal human skin by S. epidermidis is associated with induction of S. epidermidis‐specific FOXP3+ Treg cells that regulate local activation of host immune responses.29 Other members of the healthy skin microbiota, such as Propionibacterium, Streptococcus, Acinetobacter, Corynebacterium, Prevotella and Proteobacteria, are frequently reduced in AD patients.28, 30 Staphylococcus aureus can contribute to epidermal barrier disruption in a number of ways. Staphylococcus aureus downregulates terminal differentiation proteins such as filaggrin and loricrin, while secretion of proteases contributes to the disruption of the epidermal integrity via direct proteolytic activity or activation of protease‐activated receptors (PARs). Superantigens such as staphylococcal enterotoxins A and B or toxic shock syndrome toxin‐1 trigger a cytokine response that further disrupts the epidermal barrier. These enterotoxins also act as allergens, and toxin‐specific IgE contributes to cutaneous inflammation.28, 31 Staphylococcus aureus expresses exotoxins such as cytolytic α‐toxin, which damage keratinocytes, while β‐, γ‐ and δ‐toxins stimulate mast cell degranulation.28, 32 Phenol‐soluble modulins (PSMs) induce keratinocyte damage and secretion of the alarmins IL‐1α and IL‐36α, which further exaggerate skin inflammation.33 An impaired skin barrier results in increased exposure of the immune system to microbial components, resulting in a progressive cycle of inflammatory responses and tissue damage. It was recently suggested that reactivity to S. aureus can be facilitated via allergen co‐exposure and vice versa since patients with sensitization to house dust mite also show significantly more IgE reactivity to S. aureus and Escherichia coli, two abundant species in the house dust mite microbiome.34 A subset of AD patients is susceptible to eczema herpeticum (EH), and S. aureus may contribute to EH susceptibility as it has been shown to secrete products that enhance viral replication.1 Despite Malassezia species having a commensal role in healthy skin, in AD Malassezia may contribute to disease pathogenesis. Malassezia DNA has been detected in 90% of AD skin lesions, and colonization increases with disease severity.35 In addition, different Malassezia strains were found in AD and healthy individuals suggesting the existence of key pathogenic strains in AD.36 Higher levels of IgE sensitization to Malassezia have been detected in adult AD compared to healthy individuals and childhood AD.22, 36 Malassezia could contribute to AD pathogenesis by secreting immunogenic proteins that induce proinflammatory cytokines, expression of TLR2 and TLR4 on keratinocytes and induction of auto‐reactive T cells.22 Atopic dermatitis is considered a first step in the atopic diathesis, facilitated in part by the defective epidermal barrier of AD. The IL‐4/IL‐13 axis in AD is also thought to upregulate the pore‐forming claudin‐2 expression in the gut leading to barrier defects.19 In addition to the skin microbiota, AD has been associated with changes in the gut microbiota. Patients with AD have lower levels of Bifidobacterium in the gut compared to healthy controls, and Bifidobacterium levels were inversely correlated with AD disease severity.37 Several studies have shown that alterations in gut microbiota composition can precede the development of AD. Early gut colonization with C. difficile was associated with AD development,38 and low gut microbiota diversity and specifically low Bacteroidetes diversity at 1 month were associated with AD development at 2 years of age.35, 39 A recent whole‐metagenome analysis demonstrated a lower abundance of key metabolic pathways in AD children associated with depletion of mucin‐degrading bacteria such as Akkermansia muciniphila, Ruminococcus gnavus and Lachnospiraceae.40 These bacteria not only are able to influence immune development through directly influencing signalling pathways and antigen processing but also can lead to a reduced microbial diversity as these bacteria are able to degrade complex polysaccharides into short‐chain fatty acids (SCFAs)—nutrient sources that allow for gut colonization by other microbes.40 Dog exposure at birth was associated with a dose‐related reduced risk of AD in early life, suggesting that exposure to an environment rich in microbial components may be protective.41 In contrast, antibiotic exposure during the first 2 years of life is associated with an increased risk of AD.42 Infants with high faecal calprotectin levels (an antimicrobial protein used as a biomarker of intestinal inflammation) measured at 2 months of age had an increased risk of AD and asthma by 6 years of age. High faecal calprotectin was also shown to be inversely correlated with levels of E. coli. Reduced early colonization with E. coli was shown to impair IL‐10 regulation.43 3 MICROBIOME IN FOOD ALLERGY The human gut microbiome is increasingly being considered as a crucial factor in the development of food allergy, with a strong interrelation between the human gut microbiota, environmental factors, human genetics and gastrointestinal atopy.4, 44 In particular, the composition and metabolic activity of the gut microbiota are intimately linked with the development of oral tolerance.45, 46 Therefore, disturbed microbial homeostasis, especially early in life, appears to significantly influence allergic disease susceptibility. Figure 3 illustrates some of the known interactions between the gut microbiome and host mucosal cells. Recently, the oral bacterial composition in saliva samples from healthy and allergic children up to 7 years of age was described. The result confirmed that early changes in oral microbial composition seem to associate with immune maturation and allergy development.47 Milk‐allergic infants have higher total bacteria and anaerobic bacterial counts compared with healthy control children after 6 months of differential formula intake. In addition, higher proportions of Lactobacilli and lower proportions of Enterobacteria and Bifidobacteria were observed in 46 milk‐allergic infants.48 The spontaneous resolution of milk allergy in infants was associated with a specific gut microbiota composition.49 Bunyavanich et al showed that Clostridia and Firmicutes were enriched in the infant gut microbiome of subjects whose milk allergy spontaneously resolved. This result suggested that early infant gut microbiota may shape food allergy outcomes in childhood and bacterial taxa within Clostridia and Firmicutes species could be further investigated as probiotic candidates for milk allergy therapy.49 An additional study examining the gut microbiome of 141 children with egg allergy and healthy controls found that genera from Lachnospiraceae and Ruminococcaceae were associated with egg sensitization; however, there was no association between early‐life gut microbiota and egg allergy resolution by age 8 years.50 A prospective microbiome association study in 14 children with food allergy and 87 children with food sensitization showed that the genera Haemophilus, Dialister, Dorea and Clostridium were underrepresented among subjects with food sensitization, whereas the genera Citrobacter, Oscillospira, Lactococcus and Dorea were underrepresented among subjects with food allergy.51 An additional prospective study identified both temporal variation and long‐term variation in the differential abundance of specific bacterial genera in children developing IgE‐associated allergic disease, with Faecalibacterium correlating with IL‐10 and Foxp3 mRNA levels.52 Human milk oligosaccharides (HMOs) have been shown to be important in supporting the establishment of the infant gut microbiome as they are selective substrates for protective microbes such as Bifidobacteria.53 Two recent studies have described differences in HMO composition that are associated with cow's milk allergy or food sensitization.54, 55 One potential mechanism for this association is that different HMO profiles may support the establishment of different microbes early in life, thereby indirectly influencing immune maturation and education. In conclusion, a number of human studies now suggest that food allergy could be associated with changes in microbial exposures in early life, which modifies the development of host immunity and results in pathologic immune responses to food allergens. 4 MICROBIOME IN ASTHMA Composition of the microbiome at all mucosal sites changes dynamically in the first days, months and years of life. If the process of “healthy” and timely colonization is disrupted, the early‐life dysbiosis of the gut and lung becomes an important risk factor for atopy, allergy and asthma. In the Canadian Healthy Infant Longitudinal Development (CHILD) study, the lower relative abundance of the bacterial genera Lachnospira, Veillonella, Faecalibacterium and Rothia in the gut was associated with the development of asthma later in life and mechanistically linked with the reduced levels of faecal SCFAs.56 Another recent study also showed that high levels of SCFAs early in life were protective against later life sensitization and asthma.57 In a US birth cohort, lower relative abundance of Bifidobacterium, Akkermansia and Faecalibacterium, with higher relative abundance of Candida and Rhodotorula, in the gut of neonates significantly increased the risk of developing multisensitized atopy and asthma later in life.58 Interestingly, the faecal metabolome of those children at increased risk contained increased levels of pro‐inflammatory metabolites, among which 12, 13‐DiHOME was able to induce IL‐4 production in CD4+ T cells and decreased the abundance of Tregs.58 Increased abundance of nasopharyngeal Lactobacillus species during acute respiratory infection with respiratory syncytial virus (RSV) in infancy was associated with reduced risk of wheezing at 2 years of age.59 Colonization of the airways with Streptococcus, Moraxella or Haemophilus within the first 2 months of life was associated with virus‐induced acute respiratory infections in the first 60 weeks of life as well as increased risk of asthma later in life.60 Colonization of the hypopharynx within the first month of life with Moraxella catarrhalis, Haemophilus influenzae or Streptococcus pneumoniae was associated with low‐grade systemic inflammation as assessed by serum CRP, TNF‐alpha and IL‐6 levels.61 In addition, a positive association was observed between RSV infection and hospitalization in children with nasopharyngeal colonization with H. influenzae and Streptococcus.62, 63 Importantly, the relative nasopharyngeal abundance of Streptococcus and Staphylococcus negatively correlated with FEV1 and PC20 in children.64 Children who were breastfed and those who had low rates of respiratory infections in the first 2 years of life were colonized early within the upper respiratory tract with Staphylococcus species, followed by Corynebacterium, Dolosigranulum and Moraxella.65-67 However, the most impressive data regarding asthma protection have been observed in relation to traditional farming environments, associated with a high endotoxin and bacterial‐containing dust within the home.5, 15, 17, 68-71 Adult asthma patients treated with inhaled corticosteroids (ICSs) have greater upper and lower airway microbiota diversity compared to control subjects, especially enriched in the phylum Proteobacteria, which include Haemophilus, Comamonadaceae, Sphingomonadaceae, Nitrosomonadaceae, Oxalobacteraceae and Pseudomonadaceae families.72-76 The phylum Proteobacteria is also associated with worse asthma control, whereas Actinobacteria correlates with improvement or no change in asthma control.77 Interestingly, neutrophilic exacerbations of asthma and chronic obstructive pulmonary disease (COPD) correlated with the presence of Proteobacteria in the sputum, whereas eosinophilic exacerbations correlated with the presence of Bacteroidetes.78 Mycoplasma pneumoniae and Chlamydophila pneumoniae are also often found in the airways of the severe asthmatic.79 Macrolide antibiotic treatment may be useful in this subgroup of patients, but patients should be carefully selected.80 Both clarithromycin and azithromycin have been shown to reduce airway hyper‐responsiveness and decrease the abundance of Pseudomonas, Haemophilus and Staphylococcus,73, 81 while increasing the relative abundance of Streptococci.82 However, it is currently not clear how significant a role asthma medications play in directly influencing the composition of the airway microbiota. It has been reported that combination of ICS and oral glucocorticoids (GCS) correlates positively with the increased abundance of Proteobacteria, specifically Pseudomonas, and with a decreased abundance of Bacteroidetes, Fusobacteria and Prevotella.83 In corticosteroid‐resistant patients, Neisseria‐Haemophilus, Campylobacter and Leptotrichia species are present in the lower airways.75 Interestingly, treatment of COPD patients with ICS and long‐acting β2 adrenergic receptor agonists (LABAs), compared to LABA alone, significantly increased the bacterial load, increased bacterial diversity and changed composition of the microbiome in the airways.84 However, prospective longitudinal studies involving corticosteroid‐naïve asthma patients are still needed to address the issue of medication effects on the airway microbiome. The mechanisms responsible for changes in the airway microbiome are also not well understood, and in addition to medications, it is possible that the type of inflammatory response (ie, eosinophil vs neutrophil), changes in host secretions (eg, lipids85, 86) and cellular metabolism might influence microbial colonization and growth within the airways. Figure 4 illustrates the immune responses in the airways that can be influenced by the respiratory microbiome. In addition to asthma, the potential for microbes to play a role in the initial aetiology of rhinitis, or in exacerbations and progression to more severe inflammatory sequelae (such as asthma) is currently being examined. The phylum Proteobacteria is enriched in children with rhinitis, which may be clinically important given the Proteobacteria‐related asthma associations described above.69 Dysbiosis of the inferior turbinate mucosa microbiota, particularly an increase in S. aureus and a decrease in P. acnes, was associated with high total IgE levels in adults with allergic rhinitis.87 In adults with chronic rhinosinusitis (CRS), the genus Corynebacterium was depleted, accompanied by increased relative abundance of genera from the phyla Firmicutes (including Staphylococcus and Streptococcus), Proteobacteria (including Haemophilus, Pseudomonas and Moraxella) or Fusobacteria. This trend was particularly evident in subjects with comorbidities such as asthma and cystic fibrosis.88 Similarly, another study reported that middle meatus samples from CRS patients without nasal polyps were enriched in Streptococcus, Haemophilus and Fusobacterium but exhibited loss of diversity compared to healthy, CRS with nasal polyps and allergic rhinitis subject samples.89 5 LEARNING FROM ANIMAL MODELS Despite the compelling observations and associations in humans that link changes in the microbiota with allergic diseases, very often the causal relationship is not clear. Microbial dysbiosis can be the reason for the disease but can also be the consequence of inappropriate immune reactivity. Animal models have been used to better understand the role of microbes in directly influencing allergic diseases and to elucidate the molecular mechanisms underpinning host‐microbe crosstalk. 5.1 Atopic dermatitis Similar to humans, dogs naturally develop AD and associated allergen sensitization. Canine AD is associated with reduced bacterial diversity, with increased abundance of Staphylococcus pseudintermedius and Corynebacterium species.90 Canine AD lesions improve with antimicrobial treatment and a reduction in Staphylococcus species coincided with restoration of bacterial diversity.30 Filaggrin‐deficient flaky tail mice carry a loss‐of‐function filaggrin mutation, which is associated with a defective epidermal barrier, epidermal hydration and flexibility. Staphylococcus aureus abundance on the skin of these mice correlates with Th2 cytokine levels.91 Inbred DS‐Ng mice develop spontaneous dermatitis, and the skin lesions have been shown to be heavily colonized by S. aureus.29 Staphylococcus aureus triggered cutaneous inflammation involve the accessory gene regulatory (Agr) virulence systems of S. aureus and induced δ‐toxin molecules, which initiate Th2 type skin inflammation. Targeted S. aureus and Corynebacterium bovis antimicrobial therapy improved eczematous lesions and increased bacterial diversity in Adam 17 (a transmembrane metalloproteinase)‐deficient mice. Withdrawal of targeted antimicrobials resulted in a recurrence of eczema and microbial dysbiosis.30 In a mouse itch model, IL‐17A and IL‐22 drive neutrophils to limit the overgrowth of S. aureus on injured skin.25 C5aR‐deficient mice develop reduced microbial diversity, suggesting that the complement system may also regulate the skin microbiota.29 A mouse model of AD showed that application of a Vitreoscilla filiformis bacterial lysate reduced the inflammatory manifestations following allergen application.24 Studies in mice during the neonatal period suggest that tolerance to skin commensals such as S. epidermidis is preferentially established early in life. This supports the hypothesis that exposure to certain microbes at a critical window early in life is required for normal development of the immune system.30 5.2 Food allergy The potential role of the gut microbiome in food allergy has been studied in multiple murine models. Rodriguez et al92 demonstrated that intestinal colonization with Staphylococcus protects against oral sensitization and allergic responses. The microbiota of allergen‐sensitized IL‐4raF709 mice differentially promoted OVA‐specific IgE responses and anaphylaxis when reconstituted in wild‐type germ‐free mice, which could play a role in food allergy.93 The disease‐susceptible IL‐4raF709 mice display enhanced signalling through the interleukin‐4 receptor (IL‐4R) and exhibit STAT6‐dependent impaired generation and function of mucosal allergen‐specific Treg cells, which failed to suppress mast cell activation and expansion.94 Interestingly, STAT6 gene variants are also implicated in the pathophysiology of food allergy in humans.95 The gut microbiota can also regulate Th2 responses through the induction of RORγt Treg cells and Th17 cells.96 Certain bacterial strains such as Bifidobacterium longum 35624, Lactobacillus rhamnosus JB‐1, Clostridia species and Bacteroides fragilis can induce intestinal Treg cells that are able to suppress food allergy and colitis.97, 98 Pattern‐recognition receptor activation on DCs is a potential mechanism by which intestinal microbes may promote Treg cell differentiation.99 5.3 Asthma Important insights regarding the role of the microbiota in the pathogenesis of airway inflammation have come from mouse models. Neonatal mice are more susceptible to develop house dust mite (HDM)‐induced allergic airway inflammation (AAI) and airway hyper‐responsiveness (AHR) than mature mice.100 This phenomenon was associated with a shift from Gammaproteobacteria and Firmicutes towards a Bacteroidetes‐dominated microbiota and the development of PDL‐1–dependent Helios‐ Treg cells.100 Mice housed under germ‐free conditions display significantly more pronounced type 2 inflammation and AHR as compared to conventionally colonized mice. Recolonization, especially early in life, can reverse many of these immunological defects.101 Similarly, antibiotic‐driven dysbiosis in neonatal mice leads to impaired maturation of Tregs and enhanced Th2 responses and promotes proinflammatory colonic iNKT cells.80, 102-105 Conversely, specific bacterial strains, their components or metabolites can successfully induce a variety of anti‐inflammatory responses in the gut and in the lung. L. rhamnosus decreased AAI and AHR induced by Bet v 1 in mice.106 Bacterial strains isolated from neonatal mouse lungs and then administered intranasally very early in life (starting at day 2 after birth) can protect or worsen HDM‐induced airway inflammation, depending which cytokine profile they induced in vitro on precision‐cut lung slices.107 Intramuscular treatment with a DNA plasmid encoding a M. leprae 65 kDa heat‐shock protein (DNA‐HSP65) or subcutaneous injections with proteins from M. tuberculosis delivered in the presence of the TLR9 agonist CpG were able to significantly inhibit development of Der p 1‐induced AAI and AHR in MyD88‐ or Fas‐dependent manner.108 In addition, an exopolysaccharide from B. longum subsp. longum 35624 was shown to protect against colitis and AAI in murine models, which was dependent on TLR2‐induced IL‐10 secretion.109, 110 SCFAs or dietary fibres that are metabolized to SCFAs potently reduced experimental asthma, as well as increased the levels of colonic Bacteroidetes and Actinobacteria species, while decreasing the levels of Firmicutes and Proteobacteria.111, 112 Importantly, the beneficial effects of SCFAs or a high‐fibre diet were transferred to the offspring after treatment of pregnant mice via epigenetic mechanisms.112, 113 Mechanistically, SCFAs have been repeatedly shown to increase Treg numbers and effectiveness.114, 115 In addition, SCFAs influence bone marrow haematopoiesis,111 reduce effector T‐cell activity,116 improve epithelial barrier117, 118 and inhibit mast cell and ILC2 activation.119, 120 Other bacterial metabolites, such as histamine, can induce a wide and complex spectrum of regulatory mechanisms.121, 122 Increased numbers of histamine‐secreting bacteria were observed in adult patients with asthma and correlated with asthma severity.123 Histamine signalling through the H2R is involved in AAI,124 while the use of H2R antagonists in children during their first 6 months of life is associated with significantly increased risk of allergic diseases and asthma.10 6 THERAPEUTIC TARGETING OF THE MICROBIOME Despite the growing number of studies that associate changes in the microbiota with allergic and immune‐related outcomes, only a relatively small number of studies have shown clinical benefits and there are no microbe‐based therapies that are currently universally accepted for the prevention or treatment of allergies or asthma. A number of reasons can be suggested for this, which may include the poor choice of therapeutic microbes to begin with. It is likely that many confounding factors do influence the success of a microbiome therapeutic, such as diet, age, obesity, ethnicity and other environmental exposures. These need to be taken into account and controlled for. In addition, given the explosion in knowledge regarding disease endotypes, it is possible that specific microbes will need to be carefully selected to mechanistically fit with specific disease endotypes and it is likely that one intervention will not work for everyone. Certain interventions such as faecal transplantation may be too crude an approach, and until critical safety concerns are resolved, this type of intervention should not be considered outside the setting of carefully monitored clinical trials. 6.1 Atopic dermatitis Early intervention aimed at protecting the skin barrier may ameliorate progression of the atopic march in a subset of patients.19 Skin microbiome manipulation may offer novel therapeutic opportunities, as has been seen with the emollients supplemented with a Vitreoscilla filiformis lysate.125 Similarly, topically administration of Roseomonas mucosa improved clinical severity scores in adults and children with AD.125 Autologous microbiome transplant (AMT) of S. hominis and S. epidermidis showed efficacy in controlling S. aureus overgrowth.126 In addition to topical bacterial treatments, oral administration of probiotics has also been examined. Prenatal and post‐natal treatment with Lactobacillus and Bifidobacterium strains can reduce risk of AD development in infants,35, 127, 128 which may associate with changes in T cell–mediated responses.129 A mixture of probiotic strains was recently shown to reduce SCORAD index and topical steroid use in children with AD.130 Little has been reported on probiotic treatment of adults with AD, but administration of B. longum 35624 to adults with psoriasis resulted in reduced circulating CRP, TNF and IL‐17 levels, possibly due to increased numbers of Tregs, which suggests that bacteria in the gut can influence skin inflammatory activity in adults.131, 132 Taken together, supplementation with specific probiotic strains may modulate the gut bacteria in a way that influences inflammation within the skin and may protect some children against AD development.35 6.2 Food allergy The use of probiotics in food allergy treatment and prevention has been examined. Supplementation of cow's milk‐allergic children with Lactobacillus casei and Bifidobacterium lactis did not accelerate cow's milk allergy resolution.133 However, the combination of L. rhamnosus GG and extensively hydrolysed casein formula did accelerate milk allergy resolution after 6 and 12 months when compared to the formula‐only control group.134 The combination of L. rhamnosus supplementation and peanut oral immunotherapy (OIT) was evaluated in peanut‐allergic children for 18 months. The combination was effective in inducing possible sustained unresponsiveness and immune changes that suggested modulation of the peanut‐specific immune response.135 In addition, a sustained beneficial effect on psychosocial impact of food allergy at 3 and 12 months after end of treatment was recently reported.136 However, the major limitation of this study is that further work is required to determine the relative contributions of the probiotic vs OIT due to the lack of an OIT and L. rhamnosus supplementation control groups in this trial. 6.3 Asthma A significant number of studies have examined the effect of probiotic supplementation on asthma‐related outcomes. A recent systematic review of probiotic studies in children with asthma identified eleven studies eligible with a total of 910 children. The proportion of children with fewer episodes of asthma was significantly higher in the probiotic group than in the control group, but no statistical significance was observed in childhood asthma control test, asthmatic symptom in the day and night, the number of symptom‐free days, forced expiratory volume in the first second predicted and peak expiratory flow.137 In the future, it will be interesting to evaluate microbial administration directly to the airways, in addition to the gut.138 7 CONCLUSIONS Significant advances have been made in recent years in describing the composition of the microbiome in the gut, airways and skin. The changes in bacterial communities that associate with, or sometimes precede, atopic dermatitis, food allergy and asthma are being identified (summarized in Table 1). Accumulating evidence suggests that microbial exposures might be most effective at preventing atopic disorders during the first 1‐2 years of life. However, substantial gaps in our knowledge on the microbiome still exist. In particular, the field has been slow to translate potentially effective microbiome‐associated therapies into the clinic via appropriate clinical trials performed to high standards and showing meaningful clinical responses that are superior to current avoidance approaches. While the critical role of the microbiota in cancer immunotherapy has been established, there are currently no published data on the potential role of the microbiota in influencing the success of immunotherapy or biologics in allergy or asthma.139 In addition, novel probiotics and not just the traditional probiotic strains need to be clinically tested. Furthermore, microbial components or their metabolites should also be examined; in particular, the application of these novel microbial drugs to the diseased site (eg, the airways) must be explored. Lastly, there are no microbial therapeutics currently approved for routine clinical practice, and significant effort and investment are still required to identify the optimal microbial interventions for allergy and asthma. Location Phyll (Genus) Effect Reference Oral cavity ↑ Gemella haemolysans ↓ Lactobacillus gasseri, Lactobacillus crispatus Increased risk of allergic diseases 47 Intestine ↑ Staphylococcus species Protection against oral sensitization and allergic responses 92 Intestine ↑ Clostridia, Firmicutes Milk allergy resolution 49 Intestine ↑ Lachnospiraceae, Ruminococcaceae Associated with egg allergy 50 Intestine ↓ Haemophilus, Dialister, Dorea, Clostridium Associated with food sensitization 51 Intestine ↓ Citrobacter, Oscillospira, Lactococcus, Dorea Associated with food allergy 51 Intestine ↓ Escherichia coli High faecal calprotectin, impaired IL‐10 activation, increased risk of AD and asthma 43 Intestine ↓ Bifidobacterium Correlates with AD severity 37 Intestine Early colonization with C. difficile Associated with AD development 38 Intestine ↓ Bacteroidetes diversity Associated with AD development 39 Intestine ↓ Akkermansia muciniphila, Ruminococcus gnavus and Lachnospiraceae Associated with AD development 40 Intestine ↓ Lachnospira, Veillonella, Faecalibacterium, Rothia Reduced levels of faecal SCFAs, increased risk of asthma 56 Intestine ↓ Bifidobacterium, Akkermansia, Faecalibacterium ↑ Candida, Rhodotorula Increased risk of developing multisensitized atopy, increased circulating proinflammatory metabolites 58 Upper airways Early colonization with Staphylococcus species, Corynebacterium, Dolosigranulum, Moraxella Associated with lower rate of respiratory infections in the first 2 years of life 65-67 Upper airways Early colonization with Streptococcus, Moraxella, Haemophilus Increased risk of virus‐induced acute respiratory infections and increased risk of asthma 60 Upper airways ↑ Proteobacteria Associated with rhinitis in children 69 Nasopharynx ↑ Haemophilus influenzae, Streptococcus species Increased risk of hospitalization during RSV infection 62 Nasopharynx Colonization with Staphylococcus aureus Decreased risk of hospitalization during RSV infection 63 Nasopharynx ↑ Streptococcus, Staphylococcus Abnormalities in functional tests of the respiratory system 64 Nasopharynx ↑ Staphylococcus aureus ↓ P. acnes Associated with high IgE levels 87 Nasopharynx ↑ Firmicutes (Staphylococcus & Streptococcus), Proteobacteria (Haemophilus, Pseudomonas & Moraxella), Fusobacteria ↓ Corynebacterium Associated with CRS in adults 88 Nasopharynx ↑ Streptococcus, Haemophilus, Fusobacteria ↓ Diversity Associated with CRS without nasal polyps in adults 89 Nasopharynx ↑ Lactobacillus during acute respiratory infection with RSV Reduced risk of wheezing 59 Hypopharynx Colonization with Moraxella catarrhalis, Haemophilus influenzae, Streptococcus pneumoniae Low‐grade systemic inflammation 61 Lower airways ↑ Proteobacterium (Klebsiella species) (Mycoplasma pneumoniae, Chlamydophila pneumoniae) Associated with severe asthma 77, 79 Lower airways ↑ Actinobacteria Improvement in asthma control 77 Lower airways ↑ Neisseria, Haemophilus, Campylobacter, Leptotrichia Associated with resistance to corticosteroids in asthma 75 Sputum ↑ Proteobacteria Associated with neutrophilic asthma exacerbations 78 Sputum ↑ Bacteroidetes Associated with eosinophilic asthma exacerbations 78 Skin ↑ Staphylococcus aureus Epidermal barrier dysfunction, cutaneous inflammation, formation of AD skin lesions, associated with AD severity and allergen sensitization, associated with susceptibility to eczema herpeticum among AD patients 19, 21, 23 Skin Colonization with single clonal Staphylococcus aureus strains Associated with AD severity 26 Skin ↑ Malassezia species. Associated with AD severity 35 Skin ↑ Corynebacterium, Proteobacterium Associated with AD severity 21 Skin ↑ coagulase‐negative staphylococci: (Staphylococcus epidermidis, S. hominis, S. lugdunensis) Limits Staphylococcus aureus overgrowth 28 Skin Colonization with S. epidermidis TLR2 activation, epidermal barrier maintenance 1 Skin ↓ Proteobacteria (Propionibacterium, Streptococcus, Acinetobacter, Corynebacterium, Prevotella) Associated with AD 28, 30 Skin Early colonization with S. epidermidis Local activation of the host immune response through induction of S. epidermidis‐specific FOXP3 Treg cells 29 Skin ↑ in resident skin bacteria Associated with AD flares 24 This table summarizes the bacterial changes that have been associated with atopic dermatitis, food allergy or asthma. CONFLICTS OF INTEREST LOM is a consultant to Alimentary Health Ltd and has received research funding from GSK. NL, PS, ZL, MS and TE have no conflict of interest in relation to this work. AUTHOR CONTRIBUTIONS NL, PS, ZL, MS, TE and LOM contributed to drafting the manuscript. All authors read, reviewed and agreed the final version of this manuscript. REFERENCES Notes : This table summarizes the bacterial changes that have been associated with atopic dermatitis, food allergy or asthma.
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Rescooped by
Gilbert C FAURE
from Immunology and Biotherapies
November 19, 2018 3:47 AM
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Original Article from The New England Journal of Medicine — AR101 Oral Immunotherapy for Peanut Allergy... In this phase 3 trial of oral immunotherapy in children and adolescents who were highly allergic to peanut, treatment with AR101 resulted in higher doses of peanut protein that could be ingested without dose-limiting symptoms and in lower symptom severity during peanut exposure at the exit food challenge than placebo. (Funded by Aimmune Therapeutics; PALISADE ClinicalTrials.gov number, NCT02635776.)
Via Krishan Maggon
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Scooped by
Gilbert C FAURE
November 2, 2018 6:26 AM
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Two of Canada's biggest labs promote and offer something known as IgG food tests at their labs, marketed as a way to test for food sensitivities. But medical experts call these blood tests "irrelevant," "unvalidated" and "inappropriate" when it comes to tracking food intolerance.
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Gilbert C FAURE
October 22, 2018 3:42 PM
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This retrospective study reviewed serious and fatal adverse drug events (ADEs) reported to the Food and Drug Administration between 2006 and 2014. Over the 9-year study period, the number of serious ADEs reported doubled and a small number of medications accounted for a significant number of...
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Gilbert C FAURE
October 4, 2018 8:14 AM
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Back to listingNews Scientists develop a new test to safely and accurately diagnose peanut allergies 3 May 2018 MRC scientists have developed a new laboratory test to diagnose peanut allergy. The test has 98% specificity and, unlike current options, it doesn’t run the risk of false-positives or causing allergic reactions such as anaphylactic shock. The simple blood test is five times more cost-efficient compared to the oral food challenge (OFC) – the standard food allergy test – and could be adapted to test for other food allergies. Peanut allergies are among the most common food allergies in children*. Currently, doctors diagnose peanut allergy using a skin-prick test or specific IgE test but this may result in over-diagnosis or false-positives and it cannot differentiate between sensitivity and true food allergy. When skin-prick and IgE test results are unclear, allergists rely on an OFC, which consists of feeding peanut in incrementally larger doses to a patient in a highly-controlled setting in hospital to confirm allergy to the food. While the test is the gold-standard for diagnosing food allergies, there is risk of causing severe allergic reactions. Now, the researchers have developed a safer, accurate blood test in the lab. The new test, called the mast activation test (MAT), could act as a second line tool when skin-prick test results are inconclusive and before referring children and their families to specialists for an OFC, according to researchers from the MRC & Asthma UK Centre in Allergic Mechanisms of Asthma. Their new study was published in the Journal of Allergy and Clinical Immunology. Dr Alexandra Santos, an MRC Clinician Scientist at King’s College London, paediatric allergist and study lead author, said: “The current tests are not ideal. If we relied on them alone, we’d be over diagnosing food allergies – only 22% of school-aged children in the UK with a positive test to peanuts are actually allergic when they’re fed the food in a monitored setting.” Dr Santos continued: “The new test is specific in confirming the diagnosis so when it’s positive, we can be very sure it means allergy. We would reduce by two-thirds the number of expensive, stressful oral food challenges conducted, as well as saving children from experiencing allergic reactions.” Food allergy symptoms are triggered when allergens interact with an antibody called immunoglobulin E (or IgE). The food allergens activate IgE antibodies, triggering symptoms such as skin reactions, itching or constricting of the mouth, throat and airways, and digestive problems (such as stomach cramps, nausea or vomiting). The current skin-prick test and IgE test, which have been in use for decades, measure the presence of IgE antibodies. The new test focuses on mast cells, which play a crucial role in triggering allergic reactions. Mast cells activate by recognising the IgE in plasma and, in allergic patients, produce biomarkers associated with allergic reactions, which can be detected in the lab. Using blood samples from 174 children participating in allergy testing – 73 peanut allergic and 101 peanut-tolerant – the scientists added peanut protein to mast cells to screen for IgE-mediated activation. The MAT accurately identified peanut allergy with 98 specificity. (Specificity is a statistical measure in determining efficacy for diagnosis. The MAT test rarely gives positive results in non-allergic patients.) The researchers also found the test reflected the severity of peanut allergy – patients with more severe reactions have a higher number of activated mast cells. The MAT test is five times cheaper to conduct than the OFC, which requires an allergist and specialist nurses on hand to monitor for adverse reactions and provide medical support if symptoms arise. Dr Santos said: “We are adapting this test to other foods, such as milk, eggs, sesame and tree nuts. This test will be useful as we are seeing more and more children who have never been exposed to these foods because they have severe eczema or have siblings with allergies. Parents are often afraid to feed them a food that is known to cause allergic reactions.” The researchers believe the MAT test may have other uses, for example, in the food industry to detect the presence of allergens in products. Pharmaceutical companies could use it to monitor patients’ allergic response to drugs being evaluated during clinical trials. The scientists plan to transition the biomarker test out of the laboratory and into a clinical setting. They will be testing blood samples from patients with suspected allergies to further validate its utility. 5 to 8% of UK children have a food allergy with up to one in 55 children having a peanut allergy, according to Food Standards Agency estimates. Current UK guidelines recommend avoiding giving your child peanuts and foods containing peanuts before the age of six months. Other countries, such as Canada and the United States, have updated their recommendations – a move that is in the works in the UK. The researchers say updated guidelines may result in a rise in requests for peanut allergy diagnosing. This paper is available on Europe PMC. Categories Categories: Research Health categories: Blood, Inflammatory, Respiratory, Generic Strategic objectives: Lifestyles affecting health, Environment and health, Securing impact from medical research, Aim: Picking research that delivers, Aim: Research to people, Aim: Supporting scientists Locations: London Type: News article
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Scooped by
Gilbert C FAURE
October 4, 2018 8:09 AM
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Recent inquest reports into suspected food anaphylaxis deaths make harrowing reading. The recent cases were teenagers who lost their lives to a preventable cause of death. The incidence of food [...]More...
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Scooped by
Gilbert C FAURE
September 18, 2018 12:01 PM
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Welcome To 5 Strands® Affordable Testing 5 Strands® Affordable Testing provides a simple HAIR analysis test that measures food and environmental substances that cause non-IgE mediated reactions, known as INTOLERANCES. Reactions have a delayed onset with symptoms appearing several hours or days after ingestion or exposure and lasting a longer period of time. Common symptoms include eczema, bloating, diarrhea, constipation, and in more severe cases, pain, inflammation or weight problems. Our simple, non-invasive testing can quickly identify if your body is intolerant to over 650 food and environmental items. We can also test for metal/minerals and nutritional deficiencies. Our list of items tested is the most comprehensive of any test on the U.S. market today. This screening tool can help you make the dietary, environmental and lifestyle changes necessary to allow your symptoms to improve. 5 Strands® Affordable Testing scans your hair sample (10-15 strands) using bio -resonance technology and provides an extensive, easy-to-understand report. You can expect to receive your results within 5 – 7 days after the sample arrives at the processing center. Be aware that IgE (Immunoglobulin E) allergies, which are caused by the body’s immune system, are NOT measured by 5 Strands® Affordable Testing. This type of reaction, which represents only 2% of all allergic reactions, occurs within minutes of ingestion or exposure. Common symptoms range from hives, rash and swelling of the lips or face to swelling of the throat, wheezing, sudden shortness of breath and other potentially life-threatening reactions. IgE-mediated allergies are diagnosed through a blood test or skin prick test by healthcare professionals.
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Scooped by
Gilbert C FAURE
August 20, 2018 4:55 AM
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Giving You the Edge on Allergy Diagnosis with the Ability to Test for Over 2000 Allergens, Adverse Drug Reactions, Food and Environmental Allergies...
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Suggested by
LIGHTING
July 15, 2018 2:32 PM
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Food allergy is increasingly common in children, affecting about 4%‐8%. The mainstays of management remain allergen avoidance and emergency preparedness to treat allergic reactions with emergency medications. Unfortunately, these approaches are unsatisfactory for many patients and their families as the restrictions, constant vigilance, and unpredictable severity of allergic reactions negatively impact quality of life. In recent decades, there has been significant interest in developing treatments for food allergy that lead to desensitization to increase thresholds for triggering allergic reactions and decrease the risk of reacting to allergen‐contaminated food products. Epicutaneous immunotherapy (EPIT) is a novel therapy that is currently under investigation, delivering allergen via repeated applications to the skin and targeting antigen‐presenting cells in the superficial skin layers. Murine models have demonstrated that allergen uptake is an active process by skin dendritic cells with subsequent migration to draining lymph nodes. Allergen exposure to the non‐vascularized epidermis limits systemic absorption, contributing to the high‐safety profile. Results from murine experiments showed that EPIT has comparable efficacy as subcutaneous immunotherapy in terms of challenge outcomes, airway hyper‐responsiveness, and immunologic parameters. Several clinical trials of EPIT have recently been completed or are ongoing. Results support the high safety and tolerability of this approach. Efficacy data suggest that the change in threshold eliciting dose following 1 year of therapy is less than that seen compared to high‐dose (2‐4 g peanut protein) oral immunotherapy, but more prolonged treatment with EPIT appears to lead to increasing desensitization. Additional data from larger‐scale studies should provide a more robust assessment of safety and efficacy of EPIT.
Via Krishan Maggon
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Scooped by
Gilbert C FAURE
May 12, 2018 3:30 PM
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In contrast with Th1 immune responses against pathogenic viruses and bacteria, the incipient events that generate Th2 responses remain less understood. One difficulty in the identification of universal operating principles stems from the diversity of entities against which cellular and molecular...
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Scooped by
Gilbert C FAURE
May 3, 2018 11:52 AM
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Scientists says blood test could avoid costly, stressful, food tests for confirming allergy
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Suggested by
Société Francaise d'Immunologie
December 11, 2018 5:13 AM
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The prevalence of food allergy is increasing, and allergen avoidance continues to be the main standard of care. There is a critical need for safe and effective forms of immunotherapy for patients with food allergy as well as other allergic diseases.
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Scooped by
Gilbert C FAURE
December 2, 2018 11:56 AM
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Scooped by
Gilbert C FAURE
November 12, 2018 2:35 PM
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Abstract Background Patients with mastocytosis are at increased risk of anaphylaxis. The use of nonsteroidal anti‐inflammatory drugs (NSAIDs) is often discouraged because of this reason. However, the actual prevalence and severity of NSAID‐related hypersensitivity among patients with mastocytosis is unknown. Methods A double‐blind, placebo‐controlled acetylsalicylic acid (ASA) challenge up to a cumulative dose of 520 mg was performed among adult patients with mastocytosis. In addition, a retrospective search of the entire outpatient cohort was performed to obtain “real‐life” data on NSAID hypersensitivity. Results Fifty patients underwent an ASA challenge. Seventy percent had indolent systemic mastocytosis, 18% had mastocytosis in the skin, and 12% had advanced mastocytosis. The ASA challenge was positive in 1 patient who developed urticaria. The additional retrospective chart review revealed that 8 of 191 patients had a history of NSAID‐related hypersensitivity reaction(s), of whom 3 reported severe systemic reactions. All 8 patients had already experienced NSAID‐related hypersensitivity reactions before mastocytosis was diagnosed. Conclusions The frequency of ASA hypersensitivity was 2% in a prospective challenge study and 4.1% in a retrospective chart review of 191 patients with mastocytosis. NSAIDs can be administered safely to most patients with mastocytosis. Extra caution should be taken in patients with a history of hypersensitivity reactions to other drugs, or traditional risk factors for NSAID hypersensitivity. 1 INTRODUCTION Mastocytosis is a disease in which aberrant mast cells accumulate. The WHO recognizes different subtypes of SM.1, 2 The prevalence of anaphylaxis is higher in patients with mastocytosis compared to healthy persons.3, 4 A wide variety of stimuli can trigger mast cell degranulation and thereby lead to anaphylaxis.5 Historically, the use of certain medications that could theoretically trigger mast cell degranulation is discouraged in patients with mastocytosis. Among these are radiocontrast media, general anesthetics, opioid analgesics, and nonsteroidal anti‐inflammatory drugs (NSAIDs).3 For general anesthetics and radiocontrast media, case reports on severe (and sometimes lethal) anaphylaxis in patients with mastocytosis are available, although the absolute risk still appears low.6-8 The prevalence and severity of anaphylaxis due to NSAIDs in patients with mastocytosis is actually not known. Anxiety for NSAID‐related hypersensitivity reactions leads to confusion among both physicians and patients, and different advices between practices. The use of NSAIDs is therefore often avoided, resulting in the risk of mistreatment of patients with mastocytosis for several reasons. Firstly, these patients are at increased risk of cardiovascular morbidity, which often necessitates acetylsalicylic acid (ASA) for secondary prevention.4, 9 Secondly, ASA is a well‐known treatment for flushing in mastocytosis.10, 11 Thirdly, patients with mastocytosis relatively often suffer from various types of pain for which analgesics might be necessary.12, 13 Currently, they are often advised to only take acetaminophen which is not always sufficient. In our practice, we noted that many patients used NSAIDs uneventfully, until they received were diagnosed to have mastocytosis. Furthermore, previously performed NSAID challenges were always negative. We therefore hypothesized that the frequency and severity of NSAID‐related hypersensitivity is overestimated in patients with mastocytosis. For drug hypersensitivity in general, drug challenge tests are the gold standard diagnostic procedure.14 ASA is often used to test for general NSAID hypersensitivity because of its strong COX‐1‐inhibiting properties.15 Therefore, we designed a study using standardized drug challenge tests with ASA to investigate the exact prevalence and severity of NSAID hypersensitivity reactions in patients with mastocytosis. 2 METHODS 2.1 Patient eligibility Patients were recruited from the Mastocytosis Outpatient Clinic of the Erasmus University Medical center. All adult patients with biopsy‐proven cutaneous or systemic mastocytosis were eligible. Patients were excluded if they had a history of a prior NSAID‐related hypersensitivity reaction(s), uncontrolled asthma, rhinosinusitis, nasal polyps, active pregnancy, and high dosage of beta‐blocking drugs (equivalent to ≥100 mg of metoprolol), when they were not able to stop antihistamines or prednisolone, or were not deemed capable of handling possible delayed anaphylactic reactions at home. Preexistent mast cell mediator‐related symptoms such as pruritus or flushing were not considered to be exclusion criteria in order to represent the real‐life situation at an outpatient clinic. Moreover, flushing can be an indication for ASA. The frequency of ASA hypersensitivity among patients with mastocytosis was 2% in a prospective study and 4.1% in a retrospective cohort. NSAIDs can probably be safely administered to most patients with mastocytosis. A history of hypersensitivity reactions to other drugs might increase the risk of NSAID hypersensitivity among patients with mastocytosis. 2.2 Study protocol All patients underwent a double‐blind, placebo‐controlled ASA challenge in a randomized order. The minimum interval between the two test days was 14 days. The study medication was provided in a blinded fashion by the pharmacy of the Erasmus MC. Patients had to stop H1‐antagonists and leukotriene antagonists for 3 days prior to the drug challenge. The challenge took place at the Allergy Outpatient Clinic. Patients received three incremental doses of ASA of 40, 80, and 400 mg (or matched placebo tablets), leading to a cumulative dose of 520 mg. The interval between each dose was 1 hour, and patients were observed for an additional 2 hours after the administration of the third dose. Mast cell mediator‐related symptoms were systematically scored before the start of each drug challenge and after 1, 2, and 4 hours. We used an adapted form of the scoring system for food challenges as proposed by Grabenhenrich et al.16 This form scores symptoms according to organ system and severity and is in our practice routinely used for both food and drug challenges. In addition, numeric rating scale (NRS) score was obtained for mast cell mediator‐related symptoms such as pruritus and headache. An increase of 3 points in this scale during the challenge was considered significant. All challenges were conducted and assessed by MH and/or SdV. In cases of doubt, a second investigator (RGvW or PvD) was consulted to assess the symptoms. Deblinding of the investigators and patients took place 24 hours after all 50 patients completed both challenge days. 2.3 Outcomes and definitions The ASA challenge was considered positive when a patient developed objective mast cell mediator‐related symptoms within 12 hours after the administration of the third dose on the day they received the verum, and had no symptoms on the placebo day. The challenge was considered negative when a patient developed no symptoms on the verum day, regardless of any symptoms on the placebo day. The WHO criteria were used to define the subtype of mastocytosis.1 Patients with maculopapular cutaneous mastocytosis (MPCM) who never underwent bone marrow biopsy, or had negative bone marrow investigation, were categorized as mastocytosis in the skin (MIS). An atopic background was defined as a history of atopic dermatitis, asthma, rhinoconjunctivitis, and/or positive specific IgE for inhalation or food allergens. Next to atopy, other traditional risk factors for NSAID hypersensitivy were defined as the presence of asthma, nasal polyps, and chronic rhinosinusitis. Eosinophilia was defined as an absolute eosinophil count of >500 × 106 in peripheral blood. 2.4 Additional retrospective cohort study Next to the prospective challenge study, we retrospectively searched the electronic patient records of all adult patients who visited the mastocytosis center from January 2009 until January 2017 and who fulfilled the criteria for mastocytosis in the skin (MIS), cutaneous or systemic mastocytosis (SM). Patients who already participated in the challenge study were excluded from the retrospective cohort. Patients with a history of NSAID‐related hypersensitivity reactions, or patients who had proven NSAID tolerance prior to the start of this study, were subsequently contacted to obtain further clinical details. NSAID tolerance was considered as proven when a drug challenge was negative or when (accidental) NSAID ingestion was uneventful after the diagnosis of mastocytosis was made. The characteristics of the patients with and without NSAID tolerance from this retrospective cohort were compared to identify possible differences. 2.5 Ethical considerations This trial was performed according to the latest Helsinki guidelines. The study was approved by the local medical ethics committee. All participants provided written informed consent. The trial was registered in the EudraCT database, Number 2015‐004604‐37. 2.6 Statistical analysis We used IBM SPSS 21 for all analyses. Patient characteristics were noted as median with interquartile range (IQR) for continuous variables and as the number with percentage for dichotomous variables. To calculate potential differences between the groups with and without NSAID hypersensitivity, the Mann‐Whitney U test was used for continuous variables and the chi‐square test for dichotomous variables. 2.7 Power calculation The prevalence of NSAID‐related hypersensitivity reactions in the general population is <1%. We hypothesized that the risk in patients with systemic mastocytosis is only marginally higher than in the general population. With an estimated frequency of allergic reactions of 4% in our study population, inclusion of 50 subjects in total will lead to a 95% confidence interval of 1%‐13%. The estimated frequency was based on self‐reported reactions by patients in the Erasmus MC cohort combined with circumstantial data of other cohort studies on mastocytosis (see Discussion section for references). 3 RESULTS 3.1 Study population At the moment of inclusion in April 2017, 173 patients were considered eligible to participate in the trial (Figure 1), and 58 patients signed the informed consent. After inclusion, 8 patients dropped out before the ASA challenge was performed completely. One of these patients was excluded after the first challenge day because she started to use prednisolone for arthritis which was not related to the trial. Two patients experienced anaphylactoid reactions related to their mastocytosis within days after cessation of the antihistamines. The other patients withdrew consent. The inclusion process was stopped after 50 subjects completed both days of the challenge. The final study population thus consisted of 50 patients. The median age was 55 years, and most participants had indolent SM (Table 1). Age in years, median (IQR) 55 (16) Male, n (%) 16 (32) Subtype according to WHO criteria 1, 2, n (%) MIS 9 (18)a ISM With skin lesions 26 (52) Without skin lesions 9 (18) SSM 3 (6) SM‐AHN 2 (4) ASM 1 (2) Serum tryptase level at diagnosis in μg/L, median (IQR) 25.0 (17.8) Atopic background, n (%) 13 (26) Eosinophilia, n (%) 2 (4) Previous hypersensitivity reaction to any drug, n (%) 5 (10) Previous anaphylaxis due to any trigger, n (%) 23 (46) Wasp 7 (30) Unknown 7 (30) Physical stimuli 4 (17) Other drugsb 5 (22) Miscellaneousc 6 (26) ASM, aggressive systemic mastocytosis; IQR, interquartile range; ISM, indolent systemic mastocytosis; MIS, mastocytosis in the skin; SSM, smoldering systemic mastocytosis; SM‐AHN, systemic mastocytosis with associated hematological neoplasm. a One patient underwent incomplete bone marrow investigation, and 8 patients declined bone marrow punction. b Other drugs: proton pump inhibitor (1×), morphine (2×), penicillin (1×), and codeine (1×). c Miscellaneous triggers: horsefly (n = 2), jellyfish sting (n = 1), fire ant (n = 1), anesthesia (n = 1), codeine (n = 1). 3.2 Results of ASA challenge The challenge was positive in one patient (2%), who developed an urticarial rash 4 hours after ingestion of the third dose of ASA, which correspond s with a cumulative dose of 520 mg. The rash subsided after she took 10 mg of hydroxyzine. This patient had smoldering SM based on a serum tryptase level of ≥200 μg/L and hepatosplenomegaly. She had never used NSAIDs before. She had previously developed a rash after the administration of radiocontrast media and reported an increase in mast cell mediator‐related symptoms after the consumption of alcoholic beverages and histamine‐rich food. Three other patients reported subjective symptoms on the day of the verum but not on the day they received placebo. These symptoms consisted of mild flushing in 1 patient, generalized pruritus in 1 patient, and lightheadedness in 1 patient. The flushing was not considered as a positive challenge because it occurred after the second dose of 80 mg and subsided spontaneously despite the fact that the next increasing dose of ASA was administered according to protocol. Moreover, this patient has spontaneous flushes multiple times a week. Similarly, the patient with pruritus already had pruritus before the start of the challenge and the NRS score increased by 2 points throughout the day of the challenge which was below the prespecified threshold of 3 points (see Methods section). The last patient experienced lightheadedness 15 minutes after the ingestion of the third dose of ASA, but had no other mast cell mediator‐related symptoms and stable vital parameters. The serum tryptase level did not increase as compared to a baseline measurement. Seven patients had a reaction on the placebo day, of whom 1 had objective macular erythema on the arms and trunk and the other 6 patients had subjective symptoms. Four patients who had a reaction to placebo already had mast cell mediator‐related symptoms at the start of the challenge, consisting of pruritus and/or flushing. 3.3 Patients with a history of NSAID‐related reactions In addition to the challenge study, we retrospectively searched the electronic records of all adult patients with mastocytosis that visited the Erasmus MC from 2009 until 2017. Of a total of 191 patients, 8 patients had an annotation of “NSAID allergy” in their medical record. This results in a prevalence of self‐reported NSAID‐related hypersensitivity of 4.1% in our entire cohort. Fifteen patients had proven NSAID tolerance prior to this study. Table 2 summarizes the clinical characteristics of these patients. Age at diagnosis (years) Sex Subtype Skin involvement Serum tryptase at diagnosis (μg/L) Atopy Type of NSAID Timing of reaction Symptoms of reaction MC mediator‐related reaction to other stimuli 1 41 F CMa MPCM 8.6 Yes ASAb 80 mg 2 h Angioedema Penicillin, lidocaine 2 72 M ISM No 20.0 No Ibuprofen Diclofenacc Unknown Generalized pruritus, blurry vision – 3 51 F ISM MPCM 125.0 Yes Ibuprofen Diclofenacc 5 min Angioedema, palpitations, collapsed Heat 4 62 F ISM MPCM 118.0 No Diclofenac Unknown Angioedema Alcohol consumption 5 42 M ISM MPCM 31.4 No Naproxen 10 min Erythema, stridor, hypotensiond Alcohol consumption, wasp sting, temperature changes (cold) 6 40 M ISM No 24.7 Yes Acetaminophen 1000 mg 5 min Diffuse erythema Morphine, strong odors 7 48 F ISM MPCM 43.5 Naproxen 5 min Diffuse erythema – 8 68 F ISM MPCM 17.8 No Diclofenac 20 min Hypotension, collapsed Iodated contrast media ASA, acetylsalicylic acid; CM, cutaneous mastocytosis; MPCM, maculopapular cutaneous mastocytosis; NSAID, nonsteroidal anti‐inflammatory drug. a Complete workup with bone marrow investigation was negative for mastocytosis. b Hymenoptera sensitization could not be confirmed by specific IgE nor intradermal tests. c Two separate reactions at different occurrences. d Treatment at emergency department required. All patients had experienced NSAID‐related reactions before they received the diagnosis of mastocytosis. The most frequent symptoms were angioedema, erythema, and hypotension. Three patients required treatment in an emergency department. Of the patients who could reliably recall their reaction at the time of questioning, everyone experienced a reaction within 2 hours after the ingestion of the NSAID. Patient number 5 developed a reaction after the combination of naproxen and a wasp sting. Hymenoptera sensitization could not be confirmed. Although it is likely that Hymenoptera was the main culprit and naproxen acted as a cofactor, the patient was labeled as “NSAID intolerant” because of the severity of the reaction and the risk of aggravation of future reactions with the use of NSAIDs. Patient number 3 later had a drug challenge with celecoxib which was negative. Patient numbers 6 and 8 both later had a negative drug challenge with naproxen, which excludes a general nonspecific NSAID hypersensitivity. Notably, seven patients (87.5%) reported mast cell mediator‐related reactions to physical stimuli. These reactions ranged from flushing or gastrointestinal symptoms to anaphylaxis. 3.4 Characteristics associated with NSAID hypersensitivity As only one patient had a positive ASA challenge, the data from the prospective study could not be used to reliably identify any potential clinical characteristics that are associated with NSAID hypersensitivity. Therefore, the data from the retrospective cohort were analyzed for this purpose (Table 3). No NSAID hypersensitivity (n = 15) NSAID hypersensitivity (n = 8) P‐value Age, median (IQR) 51 (20) 49 (25) >.10 Male sex, n (%) 6 (40) 3 (33.3) >.10 Subtype, n (%) MIS 5a (33.3) 1b (12.5) >.10 ISM 10 (66.7) 7 (87.5) SSM 0 0 SM‐AHN 0 0 ASM 0 0 Presence of skin mastocytosis, n (%) 11 (73.3) 5 (62.5) >.10 Serum tryptase at diagnosis, median (IQR) 28.2 (10.9)c Range: 2.2‐72.0 28 (53)c Range: 8.6‐125.0 >.10 History of anaphylaxis, n (%) 5 (33.3) 4 (50) >.10 Pruritus, n (%)d 7 (46.7) 0 .021 Flushing, n (%)d 5 (33.3) 1 (12.5) >.10 Dyspepsia, n (%)d 3 (10.3) 1 (12.5) >.10 Diarrhea, n (%)d 3 (20) 0 >.10 Fatigue, n (%)d 6 (42.9) 1 (12.5) >.10 Subjective cognitive problems, n (%) 4 (40) 0 .074 Osteoporosis, n (%) 1 (7.1) 2 (28.6) >.10 Eosinophilia, n (%) 2 (13.3) 3 (37.5) >.10 Atopy, n (%) 4 (26.7) 3 (37.5) >.10 History of hypersensitivity reaction to other drugs, n (%)e 1 (6.7) 3 (37.5) .063 Alcohol intolerance, n (%)f 4/5 (44.4) 4/5 (80) >.10 MC mediator‐related reaction to physical triggers, n (%)c 5/8 (62.5) 4/5 (80) >.10 a Bone marrow investigation was incomplete in 1 patient and not performed in the other patients. b Bone marrow investigation negative, classifying this patient as cutaneous mastocytosis. c Physical triggers: heat, cold, stress, exercise. d Symptom present ≥3 d per week. e The culprit drug was amoxicillin in the NSAID‐tolerant patient. See Table 2 for the culprit drugs in the NSAID hypersensitivity group. f Not known for all patients because some patients never consume alcohol. Overall, patients with NSAID tolerance appear to have more daily mast cell mediator‐related symptoms such as flushing, cognitive problems, fatigue, and pruritus. Only the latter was statistically significant (P = .021, chi‐square test), probably due to the small numbers of patients. Patients with NSAID hypersensitivity reported more reactions to other drugs, although this difference did not reach statistical significance (P = .063). The same accounted for peripheral blood eosinophilia (P = .181), osteoporosis (P = .186), and alcohol intolerance (P = .308). Strikingly, traditional risk factors for NSAID hypersensitivity in the general population such as atopy, asthma, or rhinitis were not more frequent in the NSAID hypersensitivity group of our cohort. Neither were there any relevant differences in age, sex, serum tryptase levels, or skin involvement of mastocytosis. 4 DISCUSSION This is the first double‐blind, placebo‐controlled challenge study to investigate the prevalence and severity of ASA hypersensitivity among patients with mastocytosis. Only 1 of 50 participants (2%) had a positive ASA challenge, consisting of an urticarial rash. Three other patients had subjective symptoms to ASA. The characteristics of the study population were overall representative of a patient cohort in a tertiary center for mastocytosis, except for a relatively low number of male participants.17, 18, 13 However, the exclusion of patients with known risk factors for NSAID hypersensitivity might have led to a selection bias. Therefore, we performed an additional retrospective analysis of our entire cohort of 191 patients. This resulted in a prevalence of self‐reported NSAID‐related hypersensitivity of 4.1%. Importantly, all patients with NSAID hypersensitivity experienced one or more reactions before the diagnosis of mastocytosis was established. Although interpretation of any differences between the patients with and without NSAID hypersensitivity is difficult due to the small patient numbers, it appears from the retrospective cohort that patients with NSAID hypersensitivity more often experienced hypersensitivity reactions to other drugs and/or alcohol. It must be noted that three patients reported a hypersensitivity reaction to amoxicillin, which is the third most reported culprit for drug‐related reactions in the Netherlands. We cannot exclude that the relationship between amoxicillin and the reported reactions was based on coincidence. Another notable difference is the higher prevalence of mast cell mediator‐related symptoms among NSAID‐tolerant patients. Possibly, this difference represents the clinical practice, because patients with symptoms such as flushing are more often in need for ASA and therefore were more likely to undergo an NSAID challenge out of medical necessity. A causal explanation seems unlikely. Interestingly, 2 of 8 patients with a history of NSAID‐related hypersensitivity reactions later had negative unblinded challenges with another NSAID. This can be explained in multiple ways: They might have a specific, IgE‐mediated allergy to the culprit NSAID. Another, more likely, explanation is the fact that NSAIDs can be a cofactor to augment anaphylaxis.19, 20 The current trial does not provide prospective data on the role of NSAIDs as a cofactor in patients with mastocytosis. Also, although the use of ASA as a model for general NSAID hypersensitivity is widely accepted, a specific allergy for one type of NSAID is potentially missed with this approach. Moreover, the currently presented data cannot be extrapolated to patients with traditional risk factors for NSAID hypersensitivity, such as asthma, nasal polyposis, or atopic constitution. However, most patients with mastocytosis do not have such risk factors21; thus, most patients would fulfill the currently used inclusion criteria. Lastly, a possible caveat of drug challenges in patients with mastocytosis is the fact that many of them already have mast cell mediator‐related symptoms on a daily basis, especially as anti‐mediator medications need to be interrupted prior to a challenge. Using NRS scores, we tried to score these symptoms as objectively as possible; however, some degree of bias in the assessment of challenge studies cannot be excluded in this patient category. The prevalence of NSAID hypersensitivity in our cohort of patients with mastocytosis is only slightly higher compared to the prevalence of 1%‐2% of self‐reported NSAID‐related hypersensitivity in a general population.22 There are few comprehensive data on NSAID hypersensitivity among patients with mastocytosis published to date. One retrospective study described 20 patients who received ASA in varying dosages and schedules. Two patients (10%) reported a mild reaction: either delayed urticaria or immediate flushing.10 Other descriptive population studies reported a prevalence ranging between 2.3% and 6%, of mostly mild immediate‐type reactions.20, 23, 24 We could not find published proof of fatal anaphylaxis due to NSAIDs in patients with mastocytosis. Conversely, in a population of 137 persons with drug‐ or food‐related anaphylaxis, mastocytosis was found in only 2 patients.25 Moreover, there was no association between NSAID hypersensitivity and serum tryptase levels in a general cohort.26 An EAACI position paper advises that patients with mastocytosis and known NSAID tolerance can safely keep taking NSAIDs, but all others should undergo workup.27 However, that workup is not further specified in this study. Based on our current results, we suggest that everyone with mastocytosis who has never experienced a hypersensitivity reaction to NSAIDs, or other drugs, can safely start taking NSAIDs at home. Given the fact that patients who have experienced a hypersensitivity reaction to another drug appear to be at a higher risk of NSAID hypersensitivity reactions, it seems appropriate to administer the first dose in a clinical setting, preferably with an incremental challenge protocol. As mentioned before, the interpretation of such challenges is very delicate and requires experience in this area. Despite the placebo‐controlled approach, some patients will have only subjective symptoms to an NSAID, and although this is likely to be a “placebo reaction,” it cannot be excluded that these minor symptoms reflect some reaction to the NSAID. The risk of developing more serious reactions in the future is unclear for these patients, and careful counseling is of paramount importance. Possibly, patients with a history of NSAID‐related hypersensitivity reactions can also be challenged with another NSAID. Depending on the type and severity of the previous reaction(s), it can be safer to challenge with a selective COX‐2 inhibitor in these cases. Unfortunately, our study cannot corroborate this suggestion. Prospective placebo‐controlled studies on these topics would be highly interesting, although are hindered by potential safety issues. On a final note, although the possible benefits of ASA and NSAIDs in general for patients with mastocytosis are clear, the indication must be weighed against possible adverse effects. For instance, patients with mastocytosis already are at risk of peptic ulcer disease,28 which might be increased by the use of NSAIDs. Moreover, it is well‐known that NSAIDs can act as a cofactor in anaphylaxis. Ultimately, a careful consideration of risks and benefits needs to be made for each individual, and patients should be consulted on the possible risks. 5 CONCLUSIONS In summary, the frequency of NSAID hypersensitivity among patients with mastocytosis was 2%, as determined by a prospective double‐blind ASA challenge. The frequency of self‐reported NSAID hypersensitivity in a retrospective cohort was 4.1%. Based on the mild reactions we saw in our study, combined with the real‐life experience that all patients with severe NSAID hypersensitivity experienced these reactions prior to their diagnosis of mastocytosis, we conclude that it is safe to administer NSAIDs to most patients with mastocytosis if they do not have a history of prior NSAID hypersensitivity reactions. Extra caution might be taken in patients with previous hypersensitivity reactions to other drugs, or with traditional risk factors for NSAID hypersensitivity. ACKNOWLEDGMENTS We would like to thank N.W. de Jong, PhD (Dept. of Allergy, Erasmus MC), for her assistance with the practical organization of the challenge study, and M.S. van Maaren, MD (Dept. of Allergy, Erasmus MC), for providing and advising on the scoring system for the ASA challenges. CONFLICTS OF INTEREST The authors declare that they have no conflicts of interest. AUTHORS’ CONTRIBUTIONS MH and PvD are responsible for the concept and design of the study. MH and SdV performed the inclusion and drug challenges and collected and analyzed the data. PvH and RGvW gave advice about the design of the trial and interpretation of the data. All authors revised the manuscript on multiple occasions. REFERENCES Notes : Trial registration: This trial was registered in the EudraCT database, Number 2015‐004604‐37. ASM, aggressive systemic mastocytosis; IQR, interquartile range; ISM, indolent systemic mastocytosis; MIS, mastocytosis in the skin; SSM, smoldering systemic mastocytosis; SM‐AHN, systemic mastocytosis with associated hematological neoplasm. 3 One patient underwent incomplete bone marrow investigation, and 8 patients declined bone marrow punction. 4 Other drugs: proton pump inhibitor (1×), morphine (2×), penicillin (1×), and codeine (1×). 5 Miscellaneous triggers: horsefly (n = 2), jellyfish sting (n = 1), fire ant (n = 1), anesthesia (n = 1), codeine (n = 1). ASA, acetylsalicylic acid; CM, cutaneous mastocytosis; MPCM, maculopapular cutaneous mastocytosis; NSAID, nonsteroidal anti‐inflammatory drug. 7 Complete workup with bone marrow investigation was negative for mastocytosis. 8 Hymenoptera sensitization could not be confirmed by specific IgE nor intradermal tests. 9 Two separate reactions at different occurrences. 10 Treatment at emergency department required. 11 Bone marrow investigation was incomplete in 1 patient and not performed in the other patients. 12 Bone marrow investigation negative, classifying this patient as cutaneous mastocytosis. 13 Physical triggers: heat, cold, stress, exercise. 14 Symptom present ≥3 d per week. 15 The culprit drug was amoxicillin in the NSAID‐tolerant patient. See Table 2 for the culprit drugs in the NSAID hypersensitivity group. 16 Not known for all patients because some patients never consume alcohol.
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from Immunology and Biotherapies
October 23, 2018 2:56 AM
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Ingesting small doses of peanut products guards against allergic reactions—but an undercurrent of anxiety persists.
![Figure][1]
Jacob Kingsley, 12, visits a bakery that was off-limits before he began oral immunotherapy for a peanut allergy.
PHOTO: MADDIE MCGARVEY
Jacob Kingsley was 9 years old when he was handed the poison he'd shunned since before he could walk and told to swallow it as medicine. Obediently, he gulped down a few micrograms of peanut flour—less than 1/1000 of a peanut—diluted in grape Kool-Aid. His mother and a nurse hovered, ready to inject him with epinephrine if an itchy throat and wheezing struck.
Jacob's mother, Jennifer Kingsley, had driven him 2 hours from their home in Columbus to this doctor's office in Cincinnati, Ohio, for the first of dozens of sessions of peanut immunotherapy. Giving Jacob gradually increasing doses of peanuts, she hoped, would desensitize his immune system.
It's a strategy Kingsley hadn't pursued until she reached her breaking point. A year earlier, Jacob had swallowed a handful of popcorn that, unbeknownst to him, was laced with peanut product. He suffered a particularly frightening reaction: two bouts of intense symptoms about 6 hours apart. The incident marked his second peanut-related trip to the emergency room, and Kingsley was terrified that the next encounter could be fatal. “I decided, ‘I can't live like this,’” she says. “I was desperate.”
As Jacob sat through the hourslong appointment in Cincinnati, playing video games and swigging increasing doses of peanut-spiked Kool-Aid, he joined legions of children writing food allergy's next chapter. Today, more than 3000 people worldwide, most of them children, have undergone peanut immunotherapy, with the goal of protecting them if they accidentally encounter the food. Other children are trying immunotherapy for allergies to milk, eggs, and tree nuts. Some, like Jacob, get treatment in allergists' offices, where doctors share protocols informally and in published papers. Other children have enrolled in clinical trials, including those run by two companies racing to introduce a peanut-based capsule or skin patch. Both plan to apply for approval from the Food and Drug Administration (FDA) this year. The agency's blessing would dramatically boost immunotherapy's credibility and reach.
In a field that for decades has had nothing to offer patients beyond avoidance, immunotherapy marks a seismic shift. As it edges closer to mainstream, “There's mixed feelings, with a whole range of enthusiasm,” says Corinne Keet, a pediatric allergist-immunologist at Johns Hopkins Medicine in Baltimore, Maryland. Fear that it might cause harm is mingling with euphoria that children living constrained lives could be set free. Doctors who offer immunotherapy describe families eating in Chinese restaurants for the first time and home-schooled children rejoining their peers.
Like many medical firsts, the therapy is not perfect. “This is version 1.0,” says Brian Vickery, a pediatric allergist-immunologist at Emory University in Atlanta. He has conducted peanut immunotherapy trials and worked for 2 years at Aimmune Therapeutics, headquartered in Brisbane, California, one of the companies whose products are nearing approval. Physicians fret about oral immunotherapy's rigors—treatment must continue indefinitely—and its risks, which include the same allergic reactions it aims to prevent. Last year in Japan, a child suffered brain damage during a trial of immunotherapy for milk allergies.
Meanwhile, physicians on the front lines are navigating hazy science. No one knows exactly how immunotherapy works or who's most likely to be helped or hurt by it. “For me,” Keet says, “it's really not clear for an average child with peanut allergy whether it will make sense to do oral immunotherapy or not.”
LIKE MANY WHO STUDY food allergies, Keet was enticed by their mystery. Animal models are poor. The intensity of allergic reactions varies unpredictably, even in the same person over time. Why one child outgrows an allergy and another doesn't is unknown.
“This was something we didn't cover much in medical school” in the 1990s, says Matthew Greenhawt, a pediatric allergist-immunologist at Children's Hospital Colorado in Denver. Greenhawt's career trajectory tracks with a surge in food allergies, and these days, he can barely keep up with the stream of affected children who visit his hospital. Today, between 1% and 2% of people in the United States, the United Kingdom, and several other countries are allergic to peanuts—a rate that has roughly tripled since the mid-1990s. Other food allergies, such as those to tree nuts, are also on the rise. What's causing the increase is not well understood.
Despite rising caseloads, deaths from food allergies remain rare. Precise numbers are hard to come by, and estimates range from fewer than 10 to more than 150 a year in the United States. But even though an affected child is more likely to be struck by lightning than to die of a food allergy, the risk can feel ever-present. Parents never know when their children will happen upon culprit foods and how they'll be affected if they do. “We live in a complex world—people move food all over the place,” says David Bunning, a businessman whose two sons, now adults, have multiple food allergies. “The impact on children in terms of their confidence to explore their environment can be extreme.” Bunning's family almost never traveled or ate out. At their grandparents' house, the boys were usually confined to one room where food wasn't allowed.
Bunning now chairs the board of directors at Food Allergy Research & Education (FARE), an advocacy group in McLean, Virginia. Families like his, and the doctors who cared for their children, began to agitate for new treatments about a decade ago. Immunotherapy was the obvious candidate: Injections that desensitize the immune system to pollen, grass, pet dander, and bee venom have been around for decades.
Whether for an allergy to cats or pistachios, immunotherapy aims to disrupt the cells that swing out of control when faced with an allergen. When a child who is allergic to a food eats it, food proteins cross from the digestive tract into the bloodstream. An antibody called immunoglobulin E (IgE), which is bound to white blood cells called mast cells in tissues, recognizes the culprits. IgE activates the mast cells, which release histamine and other chemicals. In the skin, that response can lead to hives; in the respiratory tract, wheezing; and in the gut, vomiting. The most serious symptoms, such as a swollen throat or a reaction throughout the body, mark anaphylaxis, which is what families fear the most. Allergy shots blunt production of IgE, in part, researchers believe, by boosting levels of certain T cells that prompt a cascade of immune changes.
![Figure][1]
Fighting fire with fire Eating gradually increasing doses of a food allergen seems to desensitize the immune system over time. Thousands of children have tried oral immunotherapy, and a capsule to treat peanut allergies might be approved by regulators next year. But there's anxiety about the strategy's risks and unknowns.
GRAPHIC: C. BICKEL/ SCIENCE
Brief testing decades ago indicated that shots for food allergies weren't safe. So around the mid-2000s, scientists began to feed children the allergen instead. One watershed moment came in 2005, when the National Institutes of Health formed a consortium for food allergy clinical trials. A second was in 2011, when advocates sponsored a symposium at Harvard Medical School in Boston to standardize goals and strategy for the pioneering immunotherapy efforts. About 60 people attended. “The patients were very clear,” says Carla McGuire Davis, a pediatric allergist-immunologist at Texas Children's Hospital in Houston. They didn't care about eating a peanut butter sandwich; they wanted protection if they accidentally encountered one. Trialists set their end dose at a couple of peanuts and pressed ahead.
The results of early clinical trials were promising, says Hugh Sampson, a pediatric allergist-immunologist at the Icahn School of Medicine at Mount Sinai in New York City, who has studied immunotherapy in food allergies for many years. After 6 to 12 months of treatment, he says, about 70% to 80% of patients could handle higher doses of the food than before. Lab data were encouraging, too: Ingesting allergens over time seems to make mast cells less reactive, inhibiting their release of harmful chemicals. The therapy also produces other immunoglobulins: IgG4, which further inhibits mast cell activity, and IgA, which helps keep food allergens from escaping the gut (see graphic, p. 280).
The 2011 conference inspired the founding of the company now called Aimmune, fueled by more than $3.5 million from FARE. A second company, DBV Technologies, based in Montrouge, France, and New York City, expanded a few years later. Aimmune began to develop an oral product, essentially a capsule of powder derived from peanut flour with proteins held to consistent levels. In February, the company announced in a press release the results of a phase III trial involving 496 children and teenagers, with a regimen stepping up every 2 weeks through 11 dose levels. Among the 372 people in the treatment group, about 20% dropped out for various reasons, including side effects. After about a year, 96% of people who completed treatment could consume one peanut with no more than mild symptoms, 84% could tolerate two, and 63% could tolerate at least three.
DBV's skin patch represents a more conservative strategy: It delivers tiny amounts of peanut protein, the equivalent of one peanut over 3 years. Last year, DBV announced that in its phase III trial of almost 400 patients, after a year, those using the patch could, on average, eat three peanuts over the course of several hours before experiencing clinical symptoms such as vomiting or hives; before the trial, the average was just under one peanut. Outcomes varied substantially from person to person.
If one or both products are approved by FDA in the coming months, expectations are high that they'll be welcomed: Aimmune is now worth about $1.5 billion on the U.S. stock exchange. In 2016, FARE sold its share in Aimmune for $47 million.
MEANWHILE, SOME DOCTORS embrace another route: offering peanut immunotherapy in their practices. “I can treat 20 patients with $5.95 of peanut flour,” says Richard L. Wasserman, a pediatric allergist-immunologist in Dallas, Texas.
Wasserman ventured into food allergy immunotherapy 11 years ago. He developed a protocol based partly on published case reports and protocols for allergy shots, and he put IVs into his first five peanut allergy patients in case he had only seconds to rescue them from severe anaphylaxis. “When they all sailed through the first day, we stopped doing IVs,” he says. “But that's a measure of how concerned I was.”
Wasserman has since treated more than 300 children with peanut allergies and more than 400 with other food allergies. Other practitioners are joining in, among them the Cincinnati allergist whom the Kingsley family sought out: Justin Greiwe at Bernstein Allergy Group. Greiwe joined the practice in 2014, straight out of medical training. “It was a little nerve-wracking at the beginning,” he says, because no officially sanctioned oral immunotherapy protocol existed. He took precautionary measures, such as lung testing before every treatment, to help ensure patient safety.
Some clinicians—and executives at the companies developing products—aren't happy about the doctor's office treatments. “That gives a lot of us pause,” says Sampson, who in addition to his academic post is chief scientific officer of DBV. “We're very afraid that if this goes on enough, somebody is going to have an accident or a fatal reaction, and that's really going to change the FDA's viewpoint” about the products in development, he says.
Wasserman agrees about the need for caution. “Not every practicing allergist should be doing oral immunotherapy,” he says. Greiwe suggests the treatment requires a dedicated staff, and he gives every immunotherapy family his cellphone number.
Jacob was one of Greiwe's first immunotherapy patients. His mother remembers Jacob's ears burning—a minor reaction that subsided on its own. “Or he said he hated peanuts and wanted to quit,” she says. Worst was about 6 months in, when Kingsley discovered that for 2 weeks, Jacob had hidden his dose to avoid eating it. That was “the only time we ever felt danger,” she says. Stopping treatment can quickly alter the immune system, says Cecilia Berin, an immunologist at Mount Sinai, because immunotherapy requires constant exposure. When Jacob squirreled away his daily dose, the changes induced in his immune system almost certainly started to fade out, putting him at risk. Greiwe restarted him on a lower dose and, his mother says, “We got through it.”
EVEN CHILDREN WHO faithfully follow instructions face risks. The immune system can react to even subtle pressures, and the list of what can provoke a reaction to treatment is long. Exercising within a couple of hours of the dose can do it; so can a cold, a stomach virus, menstruation, or a hot shower. An asthma attack can trigger a reaction—many children with allergies have asthma as well—and so can stress. “We had a patient who had just played the violin on a stage, came down, and about 15 minutes later … took the dose and had a reaction,” Davis says.
Berin posits that external pressures such as physical activity or illness make the gut more permeable, pushing more of the immunotherapy dose into the bloodstream. But that remains hypothesis. Regardless, it's becoming clear that “there are people who react years down the road to a maintenance dose,” Keet says. For Jacob, such a moment came 9 months in. One evening while watching a movie, he downed his peanut M&M's and later ran outside with his cousins to dance in a rainstorm. He broke out in hives head to toe. Kingsley dialed Greiwe's number, and Jacob got a double dose of an allergy medication.
![Figure][1]
Food allergies are becoming more common, and a handful of foods accounts for the vast majority of allergies. But small doses of the foods can blunt allergic reactions.
PHOTO: SCIENCE PHOTO LIBRARY/SCIENCE SOURCE
The most tragic data point to date is the case in Japan. A child had enrolled in a trial of immunotherapy for milk allergies at the Kanagawa Children's Medical Center in Yokohama. He'd raised what he could ingest from less than 8 milliliters to 135 milliliters—about half a glass of milk. After 3 months on that maintenance dose, he swallowed it and soon complained of pain. Within minutes, he had stopped breathing. His heartbeat was later restored in the emergency room, but he'd gone too long without it and sustained severe brain damage, according to a statement from the hospital's president, Sumimasa Yamashita, in November 2017. Kanagawa Children's Medical Center declined to comment, saying only that the incident remains under investigation.
In its statement, the hospital noted the boy had suffered an asthma attack the day before the catastrophic dose. He also was on a protocol that aimed to rapidly escalate the volume of milk he could drink over less than 3 weeks. But why the child reacted so disastrously to that glass of milk is unknown.
“What people don't understand is this level of protection fluctuates,” says Mimi Tang, a pediatric allergist-immunologist at Murdoch Children's Research Institute in Melbourne, Australia. “It is not guaranteed, nor is it constant.”
One of the few long-term analyses was published in 2013 in The Journal of Allergy and Clinical Immunology . Keet, pediatric allergist-immunologist Robert Wood at Johns Hopkins Medicine, and their colleagues sought out 32 children who'd been in a milk immunotherapy trial. Three to 5 years later, “The results were surprising in a sobering kind of way,” Wood says. Only about a quarter “were doing great … tolerating unlimited quantities of milk without side effects.” Another quarter had abandoned the protocol and returned to strict avoidance. The rest were eating dairy products inconsistently, with intermittent or even frequent allergic reactions. “It's hard to know which comes first, whether they got complacent” about ingesting it “or backed off because [they were] having too many symptoms,” Wood says.
MORE AND MORE families are willing to live with those uncertainties because the alternative is greater anxiety. “We were scared senseless,” says Divya Balachandar, whose daughter Leena Wong, now 7 years old, had her first episode of anaphylaxis at age 4 after being touched by a cashew. Testing revealed Leena also was allergic to sesame, eggs, milk, other tree nuts, and peanuts. Balachandar, a pediatric pulmonologist in New York City, and her husband enrolled Leena in a federally funded oral immunotherapy trial for peanut allergy in 2015. “It made me nervous, really nervous, to put something in my daughter's mouth that she was allergic to,” Balachandar says. She gravitated toward a trial over treatment with a local allergist because, she says, “there were no rules” about how to treat in private practice. By this spring, Leena could eat two spoonfuls of peanut butter—about 25 peanuts—without a problem. She started second grade sitting with her classmates at lunchtime, liberated from a separate nut-free table.
Both companies developing peanut-based treatments say they had more volunteers for their trials than they could accommodate. Private practitioners usually have a waiting list; Greiwe's runs more than 4 months. At Stanford University in Palo Alto, California, which has a large food allergy research program, more than 2000 patients are waitlisted to enroll in the university's clinical trials, says Sharon Chinthrajah, an allergist-immunologist there.
More treatments are on the horizon. In Australia, Tang is working with a company that's testing an approach she pioneered, a combination of a probiotic and oral peanut immunotherapy. The probiotic should tilt the body toward producing the subset of T cells that tolerate the allergen and away from making cells that attack it, she says. Chinthrajah and others are enthusiastic about combining oral immunotherapy with a monoclonal antibody called omalizumab, which is FDA approved to treat allergic asthma. Clinical trials are also gearing up to test other monoclonal antibodies that target molecules involved in allergic inflammation.
Jacob's and Leena's families are eager to see what comes next. Jacob is also allergic to pistachios and cashews, but because he finds those foods easier to avoid than peanuts, the family has rejected immunotherapy that targets them. Leena's family is the opposite. With her older sister and her parents, Leena attends Indian functions regularly, where tree nuts are a common ingredient in sauces. In August, another episode of anaphylaxis landed her in the emergency room: She began to vomit and suffered chest tightness and eye swelling after eating Indian food her parents suspect contained cashews—despite having triple-checked with the restaurant that it did not. “I would love to do tree nuts,” Balachandar says, once immunotherapy “becomes more available and better understood.”
Physicians with deep roots in food allergy immunotherapy hope those new to it tread carefully. Doctors who offer such treatments “have to know the data cold,” including published results and side effects that may crop up, Greenhawt says. Still, he's thrilled that peanut immunotherapy treatments may soon be approved. The other day, talking with a peanut-allergic 4-year-old and his mother, Greenhawt shared what the next year might bring. “I said, ‘I'm going to see you a year from now; hopefully, we will have two products that are approved, and we can talk about which one might be best for you.’” The mother looked startled and delighted, Greenhawt says. “I've never seen somebody smile as brightly as that.”
[1]: pending:yes
Via Krishan Maggon
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October 13, 2018 2:05 AM
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As an R.D. I want people to understand the limitations of food sensitivity testing kits before they change their diets in accordance with their results.
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October 4, 2018 8:12 AM
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Lifelab Testing offer Intolerance tests and allergy tests to help you discover the cause of your symptoms. Fast results from our UK allergy and intolerance labs. Buy securely online today.
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September 18, 2018 12:05 PM
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Download PDF William D. Chey, MD, FACG1, Grigorios I. Leontiadis, MD, PhD2, Colin W. Howden, MD, FACG3 and Steven F. Moss, MD, FACG4 1Division of Gastroenterology, University of Michigan Health System, Ann Arbor, Michigan, USA; 2Division of Gastroenterology, McMaster University, Hamilton, Ontario, Canada; 3Division of Gastroenterology, University of Tennessee Health Science Center, Memphis, Tennessee, USA; and 4Division of Gastroenterology, Warren Alpert Medical School of Brown University, Providence, Rhode Island, USA Am J Gastroenterol 2017; 112: 212–238; doi:10.1038/ajg.2016.563; published online 10 January 2017 Received 28 June 2016; accepted 7 October 2016 Correspondence: William D. Chey, MD, FACG, Timothy T. Nostrant Professor of Gastroenterology and Nutrition Sciences, Division of Gastroenterology, University of Michigan Health System, 3912 Taubman Center, SPC 5362, Ann Arbor, Michigan 49109-5362, USA. E-mail: wchey@umich.edu Abstract Helicobacter pylori (H. pylori) infection is a common worldwide infection that is an important cause of peptic ulcer disease and gastric cancer. H. pylori may also have a role in uninvestigated and functional dyspepsia, ulcer risk in patients taking low-dose aspirin or starting therapy with a non-steroidal anti-inflammatory medication, unexplained iron deficiency anemia, and idiopathic thrombocytopenic purpura. While choosing a treatment regimen for H. pylori, patients should be asked about previous antibiotic exposure and this information should be incorporated into the decision-making process. For first-line treatment, clarithromycin triple therapy should be confined to patients with no previous history of macrolide exposure who reside in areas where clarithromycin resistance amongst H. pylori isolates is known to be low. Most patients will be better served by first-line treatment with bismuth quadruple therapy or concomitant therapy consisting of a PPI, clarithromycin, amoxicillin, and metronidazole. When first-line therapy fails, a salvage regimen should avoid antibiotics that were previously used. If a patient received a first-line treatment containing clarithromycin, bismuth quadruple therapy or levofloxacin salvage regimens are the preferred treatment options. If a patient received first-line bismuth quadruple therapy, clarithromycin or levofloxacin-containing salvage regimens are the preferred treatment options. Details regarding the drugs, doses and durations of the recommended and suggested first-line and salvage regimens can be found in the guideline. Introduction Helicobacter pylori infection remains one of the most common chronic bacterial infections affecting humans. Since publication of the last American College of Gastroenterology (ACG) Clinical Guideline in 2007, significant scientific advances have been made regarding the management of H. pylori infection. The most significant advances have been made in the arena of medical treatment. Thus, this guideline is intended to provide clinicians working in North America with updated recommendations on the treatment of H. pylori infection. For the purposes of this document, we have defined North America as the United States and Canada. Whenever possible, recommendations are based upon the best available evidence from the world’s literature with special attention paid to literature from North America. When evidence from North America was not available, recommendations were based upon data from international studies and expert consensus. This guidance document was developed using the GRADE (Grading of Recommendations Assessment, Development and Evaluation) system (1), which provides a level of evidence and strength of recommendation for statements developed using the PICO (patient population, intervention or indicator assessed, comparison group, outcome achieved) format. At the start of the guideline development process, the authors developed PICO questions relevant to Helicobacter pylori infection. The authors worked with research methodologists from McMaster University to conduct focused literature searches to provide the best available evidence to address the PICO questions. Databases searched included MEDLINE, EMBASE and Cochrane CENTRAL from 2000 to 11 September 2014. Search terms included “pylori, treat*, therap*, manag*, eradicat*”. The full literature search strategy is provided as Supplementary Appendix 1 online. After assessing the risk of bias, indirectness, inconsistency, and imprecision, the level of evidence for each recommendation was reported as “high” (further research is unlikely to change the confidence in the estimate of effect), “moderate” (further research would be likely to have an impact on the confidence in the estimate of effect), “low” (further research would be expected to have an impact on the confidence in the estimate of effect), or “very low” (any estimate of effect is very uncertain). The strength of recommendations was determined to be “strong” or “conditional” based on the quality of evidence, the certainty about the balance between desirable and undesirable effects of the intervention, the certainty about patients’ values and preferences, and the certainty about whether the recommendation represents a wise use of resources. A summary of the recommendation statements for this management guideline is provided in Table 1. The justification for the assessments of the quality of evidence for each statement can be found in Supplementary Appendix 2 online. Table 1. Recommendation statements What is known about the epidemiology of H. pylori infection in North America? Which are the high risk groups? H. pylori infection is chronic and is usually acquired in childhood. The exact means of acquisition is not always clear. The incidence and prevalence of H. pylori infection are generally higher among people born outside North America than among people born here. Within North America, the prevalence of the infection is higher in certain racial and ethnic groups, the socially disadvantaged, and people who have immigrated to North America (Factual statement, low quality of evidence). What are the indications to test for, and to treat, H. pylori infection? Since all patients with a positive test of active infection with H. pylori should be offered treatment, the critical issue is which patients should be tested for the infection (strong recommendation; quality of evidence not applicable). All patients with active peptic ulcer disease (PUD), a past history of PUD (unless previous cure of H. pylori infection has been documented), low-grade gastric mucosa-associated lymphoid tissue (MALT) lymphoma, or a history of endoscopic resection of early gastric cancer (EGC) should be tested for H. pylori infection. Those who test positive should be offered treatment for the infection (Strong recommendation; quality of evidence: high for active or history of PUD, low for MALT lymphoma, low for history of endoscopic resection of EGC). In patients with uninvestigated dyspepsia who are under the age of 60 years and without alarm features, non-endoscopic testing for H. pylori infection is a consideration. Those who test positive should be offered eradication therapy (conditional recommendation; quality of evidence: high for efficacy, low for the age threshold). When upper endoscopy is undertaken in patients with dyspepsia, gastric biopsies should be taken to evaluate for H. pylori infection. Infected patients should be offered eradication therapy (strong recommendation; high quality of evidence). Patients with typical symptoms of gastroesophageal reflux disease (GERD) who do not have a history of PUD need not be tested for H. pylori infection. However, for those who are tested and found to be infected, treatment should be offered, acknowledging that effects on GERD symptoms are unpredictable (strong recommendation; high quality of evidence). In patients taking long-term, low-dose aspirin, testing for H. pylori infection could be considered to reduce the risk of ulcer bleeding. Those who test positive should be offered eradication therapy to reduce the risk of ulcer bleeding (conditional recommendation; moderate quality of evidence). Patients initiating chronic treatment with a non-steroidal anti-inflammatory drug (NSAID) should be tested for H. pylori infection. Those who test positive should be offered eradication therapy (Strong recommendation; Moderate quality of evidence). The benefit of testing and treating H. pylori in a patient already taking an NSAID remains unclear (conditional recommendation; low quality of evidence). Patients with unexplained iron deficiency anemia despite an appropriate evaluation should be tested for H. pylori infection. Those who test positive should be offered eradication therapy (conditional recommendation; low quality of evidence). Adults with idiopathic thrombocytopenic purpura (ITP) should be tested for H. pylori infection. Those who test positive should be offered eradication therapy (conditional recommendation; very low quality of evidence). There is insufficient evidence to support routine testing for and treatment of H. pylori in asymptomatic individuals with a family history of gastric cancer or patients with lymphocytic gastritis, hyperplastic gastric polyps, and hyperemesis gravidarum (no recommendation; very low quality of evidence). What are evidence-based first-line treatment strategies for providers in North America? Patients should be asked about any previous antibiotic exposure(s) and this information should be taken into consideration when choosing an H. pylori treatment regimen (conditional recommendation; moderate quality of evidence). Clarithromycin triple therapy consisting of a PPI, clarithromycin, and amoxicillin or metronidazole for 14 days remains a recommended treatment in regions where H. pylori clarithromycin resistance is known to be <15% and in patients with no previous history of macrolide exposure for any reason (Conditional recommendation; low quality of evidence (for duration: moderate quality of evidence)). Bismuth quadruple therapy consisting of a PPI, bismuth, tetracycline, and a nitroimidazole for 10–14 days is a recommended first-line treatment option. Bismuth quadruple therapy is particularly attractive in patients with any previous macrolide exposure or who are allergic to penicillin (strong recommendation; low quality of evidence). Concomitant therapy consisting of a PPI, clarithromycin, amoxicillin and a nitroimidazole for 10–14 days is a recommended first-line treatment option (strong recommendation; low quality of evidence (for duration: very low quality of evidence)). Sequential therapy consisting of a PPI and amoxicillin for 5–7 days followed by a PPI, clarithromycin, and a nitroimidazole for 5–7 days is a suggested first-line treatment option (conditional recommendation; low quality of evidence (for duration: very low quality of evidence)). Hybrid therapy consisting of a PPI and amoxicillin for 7 days followed by a PPI, amoxicillin, clarithromycin and a nitroimidazole for 7 days is a suggested first-line treatment option (conditional recommendation; low quality of evidence (For duration: very low quality of evidence)). Levofloxacin triple therapy consisting of a PPI, levofloxacin, and amoxicillin for 10–14 days is a suggested first-line treatment option (conditional recommendation; low quality of evidence (For duration: very low quality of evidence)). Fluoroquinolone sequential therapy consisting of a PPI and amoxicillin for 5–7 days followed by a PPI, fluoroquinolone, and nitroimidazole for 5–7 days is a suggested first-line treatment option (conditional recommendation; low quality of evidence (for duration: very low quality of evidence)). What factors predict successful eradication when treating H. pylori infection? The main determinants of successful H. pylori eradication are the choice of regimen, the patient’s adherence to a multi-drug regimen with frequent side-effects, and the sensitivity of the H. pylori strain to the combination of antibiotics administered (Factual statement; moderate quality of evidence). What do we know about H. pylori antimicrobial resistance in the North America? Data regarding antibiotic resistance among H. pylori strains from North America remains scarce. Organized efforts are needed to document local, regional, and national patterns of resistance in order to guide the appropriate selection of H. pylori therapy (strong recommendation; low quality of evidence). What methods can be used to evaluate for H. pylori antibiotic resistance and when should testing be performed? Although H. pylori antimicrobial resistance can be determined by culture and/or molecular testing, (strong recommendation; moderate quality of evidence), these tests are currently not widely available in the United States. Should we test for teatment success after H. pylori eradication therapy? Whenever H. pylori infection is identified and treated, testing to prove eradication should be performed using a urea breath test, fecal antigen test or biopsy-based testing at least 4 weeks after the completion of antibiotic therapy and after PPI therapy has been withheld for 1–2 weeks. (Strong recommendation; Low quality of evidence (for the choice of methods to test for eradication: Moderate quality of evidence)). When first-line therapy fails, what are the options for salvage therapy? In patients with persistent H. pylori infection, every effort should be made to avoid antibiotics that have been previously taken by the patient (unchanged from previous ACG guideline (1)) (Strong recommendation; moderate quality of evidence). Bismuth quadruple therapy or levofloxacin salvage regimens are the preferred treatment options if a patient received a first-line treatment containing clarithromycin. Selection of best salvage regimen should be directed by local antimicrobial resistance data and the patient’s previous exposure to antibiotics (Conditional recommendation; for quality of evidence see individual statements below). Clarithromycin or levofloxacin-containing salvage regimens are the preferred treatment options, if a patient received first-line bismuth quadruple therapy. Selection of best salvage regimen should be directed by local antimicrobial resistance data and the patient’s previous exposure to antibiotics (Conditional recommendation; for quality of evidence see individual statements below). The following regimens can be considered for use as salvage treatment: Bismuth quadruple therapy for 14 days is a recommended salvage regimen. (Strong recommendation; low quality of evidence) Levofloxacin triple regimen for 14 days is a recommended salvage regimen. (Strong recommendation; moderate quality of evidence (For duration: low quality of evidence) Concomitant therapy for 10–14 days is a suggested salvage regimen. (conditional recommendation; very low quality of evidence) Clarithromycin triple therapy should be avoided as a salvage regimen. (conditional recommendation; low quality of evidence) Rifabutin triple regimen consisting of a PPI, amoxicillin, and rifabutin for 10 days is a suggested salvage regimen (conditional recommendation; moderate quality of evidence (For duration: very low quality of evidence)). High-dose dual therapy consisting of a PPI and amoxicillin for 14 days is a suggested salvage regimen (conditional recommendation; low quality of evidence (For duration: very low quality of evidence)). When should penicillin allergy testing be considered in patients with H. pylori infection? Most patients with a history of penicillin allergy do not have true penicillin hypersensitivity. After failure of first-line therapy, such patients should be considered for referral for allergy testing since the vast majority can ultimately be safely given amoxicillin-containing salvage regimens (strong recommendation; Low quality of evidence). Question 1: What Is Known About the Epidemiology of H. pylori Infection in North America? Which Are the High-Risk Groups? Recommendation H. pylori infection is chronic and is usually acquired in childhood. The exact means of acquisition is not always clear. The incidence and prevalence of H. pylori infection are generally higher among people born outside North America than among people born here. Within North America, the prevalence of the infection is higher in certain racial and ethnic groups, the socially disadvantaged, and people who have immigrated to North America (factual statement, low quality of evidence). H. pylori infection is usually acquired during childhood (2, 3, 4, 5, 6) although the exact means of acquisition is not always clear. Risk factors for acquiring the infection include low socioeconomic status (6, 7, 8) increasing number of siblings (9) and having an infected parent—especially an infected mother (10). In the Ulm (Germany) Birth Cohort Study, the odds ratio (OR) for acquiring H. pylori infection if a child’s mother was infected was 13.0 (95% confidence interval (CI) 3.0–55.2) (10) Apart from intra-familial spread, the infection may also be transmitted through contaminated water supplies (11) particularly in developing countries. Although infection rates for male and female children are similar (3, 12) there may be a slight male preponderance of the infection in adulthood. In a meta-analysis of observational, population-based studies, men were slightly more likely to be H. pylori-positive than women; OR=1.16 (95% CI 1.11–1.22) (12) This was confirmed in a study of adults in Ontario, Canada, in which the overall seroprevalence was 23.1% but higher in men (29.4%) than women (14.9%) (13). One explanation that has been proposed for the lower seroprevalence in women is that they may be more likely to clear H. pylori infection because of higher rates of incidental antibiotic use for other indications (12). There is evidence for a birth cohort effect on H. pylori prevalence; for example, people who were born in the 1930s are more likely to have been infected during childhood than people born in the 1960s. In a study conducted among 7310 US veterans with gastrointestinal symptoms, seroprevalence was 73% among those born before 1920 and 22% in those born after 1980 (14). The overall prevalence of the infection in these US veterans fell from 70.8% in 1997 to a plateau of around 50% after 2002. Within North America, the prevalence of H. pylori infection varies with socioeconomic status and race/ethnicity (14, 15, 16, 17). In general, the prevalence is lower among non-Hispanic whites than among other racial/ethnic groups including African Americans, Hispanic Americans, Native Americans, and Alaska natives (5, 14, 15, 18). African Americans with a higher proportion of African ancestry have been reported to have higher rates of H. pylori infection than African Americans with a lower proportion of African ancestry suggesting that racial/genetic factors may have some role in predisposition to the infection unrelated to socioeconomic factors (16). Higher prevalence rates have been found among those living close to the US/Mexico border (19, 20); in one study (19), prevalence of H. pylori assessed by stool antigen testing was 38.2%. Prevalence has also been reported to be high among Alaska natives (18) and Canadian First Nations populations (21). The prevalence of H. pylori infection is generally lower in the United States than in many other parts of the world, particularly in comparison to Asia and Central and South America (8, 22). There is, however, preliminary evidence that it may be falling in some previously high prevalence areas (22). People immigrating to North America from Asia and other parts of the world have a much higher prevalence of the infection than people born in North America (23). In one study, the seroprevalence among immigrants from East Asia was 70.1% (24). Hispanic immigrants to North America have higher rates of the infection than first- or second-generation Hispanics who were born here (25). Question 2: What Are the Indications to Test For, and to Treat, H. pylori Infection? Recommendations Since all patients with a positive test of active infection with H. pylori should be offered treatment, the critical issue is which patients should be tested for the infection (strong recommendation, quality of evidence: not applicable), All patients with active peptic ulcer disease (PUD), a past history of PUD (unless previous cure of H. pylori infection has been documented), low-grade gastric mucosa-associated lymphoid tissue (MALT) lymphoma, or a history of endoscopic resection of early gastric cancer (EGC) should be tested for H. pylori infection. Those who test positive should be offered treatment for the infection (strong recommendation, quality of evidence: high for active or history of PUD, low for MALT lymphoma, low for history of endoscopic resection of EGC). In patients with uninvestigated dyspepsia who are under the age of 60 years and without alarm features, non-endoscopic testing for H. pylori infection is a consideration. Those who test positive should be offered eradication therapy (conditional recommendation, quality of evidence: high for efficacy, low for the age threshold). When upper endoscopy is undertaken in patients with dyspepsia, gastric biopsies should be taken to evaluate for H. pylori infection. Infected patients should be offered eradication therapy (Strong recommendation, high quality of evidence). Patients with typical symptoms of gastroesophageal reflux disease (GERD) who do not have a history of PUD need not be tested for H. pylori infection. However, for those who are tested and found to be infected, treatment should be offered, acknowledging that effects on GERD symptoms are unpredictable (strong recommendation, high quality of evidence). In patients taking long-term low-dose aspirin, testing for H. pylori infection could be considered to reduce the risk of ulcer bleeding. Those who test positive should be offered eradication therapy (conditional recommendation, moderate quality of evidence). Patients initiating chronic treatment with a non-steroidal anti-inflammatory drug (NSAID) should be tested for H. pylori infection (strong recommendation, moderate quality of evidence). Those who test positive should be offered eradication therapy. The benefits of testing and treating H. pylori in patients already taking NSAIDs remains unclear (conditional recommendation, low quality of evidence). Patients with unexplained iron deficiency (ID) anemia despite an appropriate evaluation should be tested for H. pylori infection. Those who test positive should be offered eradication therapy (conditional recommendation, high quality of evidence). Adults with idiopathic thrombocytopenic purpura (ITP) should be tested for H. pylori infection. Those who test positive should be offered eradication therapy (conditional recommendation, very low quality of evidence). There is insufficient evidence to support routine testing and treating of H. pylori in asymptomatic individuals with a family history of gastric cancer or patients with lymphocytic gastritis, hyperplastic gastric polyps and hyperemesis gravidarum (no recommendation, very low quality of evidence). The ACG’s 2007 treatment guideline on the management of H. pylori infection (26) listed the following as established indications for diagnosis and treatment: Active PUD (gastric or duodenal). Confirmed history of PUD (not previously treated for H. pylori). Gastric MALT lymphoma (low grade). After endoscopic resection of EGC. The current guideline extends the list of potential indications to test patients for H. pylori infection. There are varying levels of evidence in support of the different potential indications for testing that are listed below. For some of these, the decision to test an individual patient for H. pylori will be influenced by clinical judgment and considerations of a patient’s general medical condition. Not all of these potential indications are given a definite recommendation, so that clinicians may exercise their judgment for individual patients. There is no justification in North America for universal or population-based screening. PUD The evidence in support of the 2007 recommendation was substantive at that time and these broad recommendations are still pertinent. All patients with a new diagnosis or a past history of PUD should be tested for H. pylori infection. Ideally, tests which identify active infection such as a urea breath test, fecal antigen test, or when endoscopy is performed, mucosal biopsy-based testing should be utilized. Because of the higher pretest probability of infection, patients with documented PUD represent a rare group, where it is acceptable to utilize an IgG H. pylori antibody test. In most other circumstances where the pretest probability of infection is lower, tests which identify active disease are preferred over antibody testing. Patients with a history of PUD who have previously been treated for H. pylori infection should undergo eradication testing with a urea breath test or fecal antigen test. Patients with evidence of ongoing infection should be treated appropriately. Gastric mucosa-associated lymphoid tissue (MALT) lymphoma The term “MALT lymphoma” has largely been supplanted by “marginal zone B-cell lymphoma of MALT type”. Identification of this neoplasm remains a key indication to test for, and to eradicate, H. pylori infection. A review published in 2009 identified and summarized six prospective cohort studies of treatment for H. pylori infection in patients with gastric MALT lymphoma (also referred to as “localized B-cell lymphoma of the stomach”) but found no systematic reviews or randomized controlled trials (27). Tumor regression was reported in 60–93% of patients after eradication of H. pylori infection, but response was inconsistent, with some patients showing a delayed response and some showing tumor relapse within a year of treatment. More recent studies have confirmed these observations. In a Japanese series, 77% out of 420 patients treated for H. pylori infection showed either complete histological response or probable minimal residual disease (the investigators’ definition of response), although 10 (3%) responders relapsed in a mean of 6.5 years (28). Among infected patients who did not respond to eradication treatment, there was progression of the disease in 27%. Among 120 patients in Germany followed for a median of 122 months, there was initial complete remission in 80% following treatment of H. pylori infection (29). Out of these, 3% had macroscopic recurrence of disease within 24 months, and another 17% had histological residual disease found after a median of 48 months. A recent review has suggested that treatment of H. pylori infection may also be beneficial for patients diagnosed with diffuse large B-cell lymphoma of the stomach (30). Early gastric cancer Three recent meta-analyses have each found that the incidence of metachronous gastric cancer following the endoscopic resection of a gastric neoplasm was reduced by the eradication of H. pylori infection (31, 32, 33). The most inclusive analysis by Yoon et al. (33) included 13 studies (three prospective and 10 retrospective) comprising 6687 patients. The pooled OR of gastric cancer in patients successfully cured of H. pylori was 0.42 (95% CI 0.32–0.56); in a subgroup analysis of the three prospective studies, the OR was 0.39 (95% CI 0.20–0.75) (33, 34). The other two meta-analyses yielded similar results (31, 32). Most recently, a meta-analysis comprising 24 studies (22 out of which were conducted in Asia) confirmed a lower rate of metachronous EGC following treatment of H. pylori infection; the incidence rate ratio was 0.54 (95% CI 0.46–0.65) (34). Dyspepsia (uninvestigated) Dyspepsia (defined as pain or discomfort centered in the upper abdomen) is highly prevalent in North America and elsewhere. In North America, most patients with dyspepsia will not have serious underlying, organic disease to explain their symptoms. That is, most will be found to have functional dyspepsia (FD), which is discussed elsewhere in this guideline. The ACG’s 2007 guideline on H. pylori management (26) included uninvestigated dyspepsia (depending upon H. pylori prevalence) in its list of established indications for diagnosis and treatment of H. pylori infection. The test and treat strategy for H. pylori infection was endorsed for patients under age 55 with dyspeptic symptoms and without alarm features. In the UK, the Bristol Helicobacter Project randomized 1517 H. pylori-positive adults to treatment for H. pylori infection or placebo and followed them prospectively (35). Among those treated for the infection, of whom over 90% achieved successful eradication, there was a small but statistically significant (P<0.05) reduction in subsequent consultations at the primary care level for dyspeptic complaints. The Cochrane Collaboration’s review on initial management strategies for dyspepsia was published in 2005 (36). As of early 2016, it had not been updated. A “test and treat” strategy for H. pylori had been found to be more effective than empirical acid suppression with either a proton pump inhibitor (PPI) or H2-receptor antagonist in managing dyspepsia (relative risk (RR) 0.59; 95% CI 0.42–0.83). This conclusion differs from an individual patient data meta-analysis which included three RCTs of 1537 patients randomized to the “test and treat” strategy or empirical acid suppression for the management of dyspepsia in the primary care setting (37). Although there was no significant difference between the groups in terms of symptom cure at 12 months, there was a trend for reduced overall costs in those assigned to “test and treat”. An individual patient data meta-analysis included five RCTs of 1924 patients randomized to “test and treat” or to prompt upper endoscopy for the evaluation of dyspeptic symptoms (38). After 1 year, the RR of remaining symptomatic was 0.95 (95% CI 0.92–0.99) in favor of prompt endoscopy. However, costs were lower with the “test and treat” approach. Prompt endoscopy for all patients with dyspepsia is neither feasible nor cost-effective. Functional dyspepsia A Cochrane systematic review published in 2006 concluded that there was a small but statistically significant benefit of treating H. pylori infection in patients with FD (39). In 17 RCTs comprising over 3500 patients, the RR reduction seen with treatment of H. pylori infection was 10% (95% CI 6–14%) and the number needed to treat (NNT) to cure one patient with FD was 14 (95% CI 10–25) (39). A subsequent update of that Cochrane review included 21 trials comprising 4331 patients (40). Most trials assessed patients’ symptoms 12 months after treatment. This study validated the NNT of 14 but with a narrower 95% CI (10–20). The Rome IV criteria have suggested subgrouping patients with FD into two groups, epigastric pain syndrome (epigastric pain and/or burning) or post-prandial distress syndrome (meal-related early satiation and/or fullness), while acknowledging that there may be considerable overlap between these (41). Although treatment trials have not utilized these newest criteria, improvement has been shown for patients with either predominant epigastric pain or predominant dysmotility-type symptoms following eradication of H. pylori infection (40). Since some FD patients with H. pylori infection experience durable benefit following eradication therapy, we recommend testing for, and treating, H. pylori in patients with FD. This aligns with a recent guideline by the American Gastroenterological Association, which recommends collecting biopsies of normal-appearing gastric mucosa to test for H. pylori when performing endoscopy in patients with dyspeptic symptoms (42). At the time of preparing this guideline, the ACG and the Canadian Association of Gastroenterology were in the process of preparing a joint guideline on management of uninvestigated dyspepsia and FD (43). Gastroesophageal reflux disease (GERD) There is no proven causal association between H. pylori infection and GERD. On a geographical basis, there is a negative association between the prevalence of H. pylori infection and the prevalence and severity of GERD (44). Barrett’s esophagus is more common among individuals who are not infected with H. pylori (45). The risk of esophageal adenocarcinoma among patients with Barrett’s esophagus is lower among those with H. pylori infection (45). The ACG’s 2007 guideline on H. pylori (26) reviewed the evidence for any change in GERD symptoms or severity following eradication of H. pylori infection. In North Americans who acquire H. pylori infection, the most likely phenotype is antral-predominant gastritis, hypergastrinemia, parietal cell hyperplasia, and increased gastric acid secretion. Such individuals who also have GERD may experience an improvement in GERD symptoms following eradication of H. pylori infection as gastric acid secretion slowly decreases in association with resolution of antral-predominant gastritis and hypergastrinemia (46). In a post hoc analysis of eight RCTs of the treatment of H. pylori infection in duodenal ulcer patients, there was no significant difference in the development of erosive esophagitis or GERD symptoms between those with successful and failed eradication (47). Among patients with pre-existing GERD, there was a worsening of symptoms in 7% of those cured of the infection and in 15% of those with persistent infection (OR=0.47; 95% CI 0.24–0.91; P=0.02). It is theoretically possible, however, that patients with corpus-predominant gastritis may experience onset or worsening of GERD symptoms following H. pylori eradication as a consequence of restitution of parietal cell mass and increased gastric acid secretion. However, this scenario should be relatively uncommon in North America. In a community-based study from the UK (the Bristol Helicobacter Project), treatment for H. pylori infection was not associated with an increase in the prevalence of heartburn or other reflux symptoms (48). Similarly, treatment for H. pylori infection did not improve reflux symptoms in patients with pre-existing symptoms. A systematic review of 27 published studies concluded that eradication of H. pylori infection from patients with duodenal ulcer did not predispose to the development of GERD (49) or worsen symptoms in patients with established GERD (49). Others have reported that cure of H. pylori infection in patients with erosive esophagitis before starting PPI therapy does not influence healing rates or symptom response (50, 51, 52). Therefore, based upon currently available evidence, there is no indication to test a patient with typical GERD symptoms for H. pylori infection unless that patient also has a history of PUD or dyspeptic symptoms. Patients with GERD who are tested for H. pylori infection for any reason and who are found to be positive should be offered treatment for the infection acknowledging that GERD symptoms are unlikely to improve. Long-term treatment with PPIs in H. pylori-positive individuals with corpus-predominant gastritis may promote the development of atrophic gastritis (53, 54). Although eradication of the infection before initiating PPI therapy may prevent the progression to atrophic gastritis (55), the clinical relevance of this is unclear. Low-dose aspirin use Aspirin (acetylsalicylic acid, ASA) is frequently recommended for patients with cardiovascular risk factors or following a major cardiovascular event (56). ASA use increases the risk of upper GI tract ulceration. H. pylori infection is a recognized risk factor for the development of ulcers and for ulcer bleeding during low-dose ASA treatment (57, 58). In a study conducted in Canada, Australia, the UK and Spain, the prevalence of peptic ulcer at endoscopy among 187 middle-aged and elderly patients taking ASA in doses of 75–325 mg daily was 10.7% (95% CI 6.3–15.1%) (59). H. pylori infection was a significant risk factor for ASA-related duodenal ulcer (OR=18.5; 95% CI 2.3–149.4) but not for gastric ulcer (OR=2.3; 95% CI 0.7–7.8). In a study from Hong Kong, patients with an episode of peptic ulcer bleeding while on low-dose ASA were studied according to H. pylori status (60). Those who were cured of H. pylori infection and subsequently re-started on ASA, had a similar rate of recurrent ulcer bleeding as in a previously ASA-naive cohort without bleeding who were started on low-dose ASA. Thus, eradication of H. pylori infection from patients with ASA-associated ulcer bleeding reduces the risk of recurrent bleeding. Regarding other anti-platelet agents, the 2010 expert consensus document jointly prepared by the ACG, the American College of Cardiology Foundation and the American Heart Association acknowledged that H. pylori infection was an established risk factor for upper GI bleeding among patients using thienopyridine anti-platelet agents (61) but made no specific recommendations concerning testing for, or treating, the infection in patients taking these medicines. However, testing for H. pylori will commonly be indicated in patients using these agents since most will also be taking ASA. In the absence of a prospective randomized study addressing H. pylori eradication in North American patients at increased risk for adverse cardiovascular outcomes, we suggest testing for H. pylori when starting prophylactic low-dose aspirin, while acknowledging that the evidence base for this recommendation is weak. Non-steroidal anti-inflammatory drug (NSAID) use H. pylori infection is an independent risk factor for NSAID-induced ulcers and ulcer bleeding (62, 63). Eradication of H. pylori infection before starting NSAID treatment reduces the development of ulcers and risk of ulcer bleeding (64, 65). A 2005 meta-analysis of five RCTs suggested that eradication of H. pylori infection among patients taking NSAIDs was associated with a 57% reduction in the incidence of peptic ulcer (OR=0.43; 95% CI 0.20–0.93) (66). The benefits of H. pylori eradication were greatest in patients who were previously NSAID-naive. Eradication of H. pylori infection before starting NSAID therapy may be the single most cost-effective strategy for the primary prevention of NSAID-associated ulcers in adult patients (67). The benefit of H. pylori eradication in patients already taking NSAIDs is less clear (68). RCTs suggest that H. pylori eradication does not reduce the incidence of new peptic ulcers in chronic NSAID users (69) and that PPI therapy provides a more effective ulcer risk reduction strategy than H. pylori eradication in patients on chronic NSAIDs (66). The ACG’s most recent practice guideline on the prevention of NSAID-related ulcer complications (63) concluded that H. pylori infection increases the risk of NSAID-related GI complications, that there would be at least a potential advantage of testing for the infection in patients requiring long-term NSAID therapy, and that the infection should be eradicated when identified. Iron deficiency anemia H. pylori infection has been associated with ID and iron deficiency anemia (IDA). In a meta-analysis of observational studies, the pooled ORs for ID and IDA in H. pylori-infected individuals were 1.4 (95% CI 1.2–1.6) and 2.0 (95% CI 1.5–2.9), respectively. A separate meta-analysis of 15 observational studies also found that IDA was more prevalent in H. pylori-infected individuals compared with H. pylori-negative controls (OR=2.2; 95% CI 1.5–3.2) (70). Adolescents with IDA have been reported to have a higher prevalence of H. pylori infection than non-anemic controls (71). H. pylori-infected adolescents and adults with IDA respond to oral iron therapy whether or not accompanied by treatment for H. pylori infection. However, the response to iron therapy in H. pylori-infected patients with IDA may be enhanced by the concomitant eradication of the infection (71, 72). A meta-analysis of 16 RCTs conducted among patients with IDA and H. pylori infection found statistically significant differences in favor of H. pylori eradication with oral iron over oral iron alone for increases in hemoglobin (Hgb), serum iron and serum ferritin (SF) levels (P<0.00001 for each) (73). In a separate meta-analysis of four interventional trials, the weighted mean difference in Hgb levels in favor of combined eradication treatment and oral iron vs. oral iron alone was 4.1 g/dl (95% CI −2.6–10.7); that for SF levels in five trials was 9.5 μg/l (95% CI −0.5–19.4) (70). A Cochrane systematic review is being conducted on the topic of the eradication of H. pylori infection for ID but its findings have not yet been reported (74). Idiopathic thrombocytopenic purpura (ITP) There is evidence from small randomized and non-randomized trials for a sustained improvement in platelet counts after eradication of H. pylori infection in a proportion of adult patients with ITP (75, 76, 77). The evidence is less compelling for children with ITP (78). A systematic review of 25 studies (1555 adult patients), all of which included at least 15 patients, found that platelet counts in ITP patients tended to increase after H. pylori eradication (79). Among 696 evaluable patients, 43% achieved a complete response (defined as a platelet count ≥100 × 109/l), and an additional 50% had an overall response (defined as a platelet count ≥30 × 109/l and at least a doubling of the baseline platelet count). Response rates were lower in patients with a baseline platelet count of <30 × 109/l. In general, response rates were higher in regions with high background H. pylori prevalence and in patients with mild degrees of thrombocytopenia. In their practice guideline published in 2011 (80), the American Society of Hematology (ASH) suggested that “screening for H. pylori infection be considered in adults with ITP in whom eradication therapy would be used if testing is positive” (evidence grade 2C). The ASH also recommended that eradication therapy be administered to adults with ITP who were found to have H. pylori based on a test of active infection (evidence grade 1B). The ASH has recommended against testing children with ITP for H. pylori infection (80). Asymptomatic individuals and the risk of gastric cancer Evidence that eradication of H. pylori infection reverses the gastric premalignant changes of gastric atrophy and intestinal metaplasia is conflicting. A meta-analysis of 12 studies (2658 patients) published up until 2009 reported that eradication was associated with a significant reduction in atrophic gastritis in the corpus (P=0.006) but not in the antrum (P=0.06); there was no evidence for a significant effect on intestinal metaplasia in either the corpus (P=0.42) or antrum (P=0.76) (81). A Cochrane systematic review and meta-analysis examined six RCTs (five of which were in Asian populations) that studied the effects of H. pylori eradication treatment against either placebo or no treatment on the subsequent development of gastric cancer among asymptomatic and otherwise healthy-infected adults (82). All trials followed subjects for at least 2 years. The quality of evidence was assessed as moderate. The subsequent incidence of gastric cancer was 1.6% among 3294 treated individuals and 2.4% among 3203 untreated controls (RR=0.66; 95% CI 0.46–0.95). The overall NNT was 124 (95% CI 78–843). However, assuming that the benefits of H. pylori eradication persist for life, the NNT could be as low as 15 among Chinese men. Since the lifetime risk of gastric cancer is lower in the United States, the corresponding NNT to prevent one case here would be 95 for men and 163 for women. A recent meta-analysis of 24 studies, 22 of which were conducted in Asia, showed that treatment of H. pylori infection in asymptomatic, infected adults led to a reduced incidence of gastric cancer. The greatest benefit was seen in people living in regions with the highest incidence of gastric cancer; reported RRs for regions of low, intermediate and high incidence of gastric cancer were, respectively, 0.80, 0.49, and 0.45 (34). Other gastrointestinal and non-gastrointestinal disorders Associations have been proposed between H. pylori infection and numerous other disorders (83). In most cases, biological plausibility and the level of evidence to support a causal association has been weak to non-existent. Thus, no formal recommendation can be offered. Controlled trials have suggested a benefit of H. pylori eradication in healing lymphocytic gastritis (84) and inducing regression of hyperplastic gastric polyps (85). There is some data to suggest a weak association between H. pylori infection and hyperammonemia and hepatic encephalopathy (HE) in patients with cirrhosis (86); trials evaluating H. pylori therapy in patients with HE have yielded conflicting results. In a meta-analysis of observational studies, the prevalence of H. pylori infection in pregnant women with hyperemesis gravidarum was higher than in matched controls (87). An association between H. pylori infection and major cardiovascular events including myocardial infarction and stroke has been postulated. However, evidence is of low quality and insufficient to establish causality (88). A Cochrane systematic review of H. pylori infection in Parkinson’s disease (89) identified three clinical trials and concluded that there was insufficient evidence to support screening for H. pylori infection in this population. Limited evidence suggests that symptoms of Parkinson’s may improve with H. pylori eradication, perhaps due to increases in the absorption and bioavailability of levodopa. Further randomized, controlled trials were encouraged. An evidence-based review of treating H. pylori infection in patients with urticaria found only low-quality evidence (90); nine out of 10 trials identified showed no benefit from H. pylori eradication. A meta-analysis has reported higher levels of glycosylated hemoglobin in H. pylori-positive patients with type 1 diabetes compared with non-infected patients (91). However, glycemic control did not improve in the short term following eradication of H. pylori. An inverse association has been reported between the prevalence of H. pylori infection and obesity (92). There may also be a weak inverse association between H. pylori infection and allergic or atopic disorders (93, 94) including eosinophilic esophagitis (95, 96, 97, 98, 99, 100) as well as celiac disease (101) and inflammatory bowel disease (102). Question 3: What Are Evidence-Based First-Line Treatment Strategies for Providers in North America? Recommendations Patients should be asked about any previous antibiotic exposure(s) and this information should be taken into consideration when choosing an H. pylori treatment regimen (conditional recommendation, moderate quality of evidence). Clarithromycin triple therapy consisting of a PPI, clarithromycin, and amoxicillin or metronidazole for 14 days remains a recommended treatment option in regions where H. pylori clarithromycin resistance is known to be <15% and in patients with no previous history of macrolide exposure for any reason (conditional recommendation, low quality of evidence (for duration: moderate quality of evidence)). Bismuth quadruple therapy consisting of a PPI, bismuth, tetracycline, and a nitroimidazole for 10–14 days is a recommended first-line treatment option. Bismuth quadruple therapy is particularly attractive in patients with any previous macrolide exposure or who are allergic to penicillin (strong recommendation, low quality of evidence). Concomitant therapy consisting of a PPI, clarithromycin, amoxicillin and a nitroimidazole for 10–14 days is a recommended first-line treatment option (Strong recommendation, low quality of evidence (for duration: very low quality of evidence)). Sequential therapy consisting of a PPI and amoxicillin for 5–7 days followed by a PPI, clarithromycin, and a nitroimidazole for 5–7 days is a suggested first-line treatment option (conditional recommendation, low quality of evidence (for duration: very low quality of evidence). Hybrid therapy consisting of a PPI and amoxicillin for 7 days followed by a PPI, amoxicillin, clarithromycin and a nitroimidazole for 7 days is a suggested first-line treatment option (conditional recommendation, low quality of evidence (For duration: very low quality of evidence)). Levofloxacin triple therapy consisting of a PPI, levofloxacin, and amoxicillin for 10–14 days is a suggested first-line treatment option (conditional recommendation, low quality of evidence (for duration: very low quality of evidence)). Fluoroquinolone sequential therapy consisting of a PPI and amoxicillin for 5–7 days followed by a PPI, fluoroquinolone, and nitroimidazole for 5–7 days is a suggested first-line treatment option (conditional recommendation, low quality of evidence (For duration: very low quality of evidence)). H. pylori is an infectious disease that is typically treated with combinations of 2–3 antibiotics along with a PPI, taken concomitantly or sequentially, for periods ranging from 3 to 14 days. In clinical practice, the initial course of eradication therapy, heretofore referred to as “first-line” therapy, generally offers the greatest likelihood of treatment success. Thus, careful attention to the selection of the most appropriate first-line eradication therapy for an individual patient is essential. There is no treatment regimen which guarantees cure of H. pylori infection in 100% of patients. Indeed, there are currently few, if any regimens which consistently achieve eradication rates exceeding 90% (103). In developing this guideline for North America, we conducted comprehensive literature searches to identify randomized, controlled trials which have evaluated the efficacy of treatment regiments in the United States and Canada. Wherever possible, we have tried to highlight these data and use them to develop treatment recommendations. Unfortunately, although H. pylori was the subject of many randomized, controlled trials conducted in North America during the first decade of this century, the number of treatment trials assessing modern regimens is modest to non-existent. As such, we were forced to rely upon clinical trial data generated in other parts of the world when considering a number of regimens. Development of this guideline has made clear the need for clinical trials to evaluate the efficacy of modern treatment regimens and organized efforts to monitor H. pylori antibiotic resistance in North America. To provide readers a sense of the author’s preferences, we have taken the liberty of utilizing the words “recommended” vs. “suggested” in the italicized statements that address each of the treatment regimens. A listing of available first-line treatment options can be found in Table 2. A schema to assist providers to choose the best therapy for an individual patient can be found in Figure 1. Table 2. Recommended first-line therapies for H pylori infection Regimen Drugs (doses) Dosing frequency Duration (days) FDA approval Clarithromycin triple PPI (standard or double dose) BID 14 Yesa Clarithromycin (500 mg) Amoxicillin (1 grm) or Metronidazole (500 mg TID) Bismuth quadruple PPI (standard dose) BID 10–14 Nob Bismuth subcitrate (120–300 mg) or subsalicylate (300 mg) QID Tetracycline (500 mg) QID Metronidazole (250–500 mg) QID (250) TID to QID (500) Concomitant PPI (standard dose) BID 10–14 No Clarithromycin (500 mg) Amoxicillin (1 grm) Nitroimidazole (500 mg)c Sequential PPI (standard dose)+Amoxicillin (1 grm) BID 5–7 No PPI, Clarithromycin (500 mg)+Nitroimidazole (500 mg)c BID 5–7 Hybrid PPI (standard dose)+Amox (1 grm) BID 7 No PPI, Amox, Clarithromycin (500 mg), Nitroimidazole (500 mg)c BID 7 Levofloxacin triple PPI (standard dose) BID 10–14 No Levofloxacin (500 mg) QD Amox (1 grm) BID Levofloxacin sequential PPI (standard or double dose)+Amox (1 grm) BID 5–7 No PPI, Amox, Levofloxacin (500 mg QD), Nitroimidazole (500 mg)c BID 5–7 LOAD Levofloxacin (250 mg) QD 7–10 No PPI (double dose) QD Nitazoxanide (500 mg) BID Doxycycline (100 mg) QD BID, twice daily; FDA, Food and Drug Administration; PPI, proton pump inhibitor; TID, three times daily; QD, once daily; QID, four times daily. a Several PPI, clarithromycin, and amoxicillin combinations have achieved FDA approval. PPI, clarithromycin and metronidazole is not an FDA-approved treatment regimen. b PPI, bismuth, tetracycline, and metronidazole prescribed separately is not an FDA-approved treatment regimen. However, Pylera, a combination product containing bismuth subcitrate, tetracycline, and metronidazole combined with a PPI for 10 days is an FDA-approved treatment regimen. c Metronidazole or tinidazole. Figure 1. Selection of a first-line H. pylori treatment regimen. With very few exceptions, the most common adverse events associated with antibiotics used to treat H. pylori infection are gastrointestinal in origin (for example: nausea, dysgeusia, dyspepsia/abdominal pain, diarrhea). As such, we have not listed adverse events for most of the therapies. Where unusual adverse events can occur with a specific therapy, we have tried to point that out. Clarithromycin triple therapy The previous ACG guideline from 2007 recommended 14 days of treatment with a PPI, clarithromycin, and amoxicillin (clarithromycin-based triple therapy) or—in patients with an allergy to penicillin—metronidazole as an alternative to amoxicillin. At that time, eradication rates for clarithromycin triple therapy were reported to be 70–85% and were highly influenced by the underlying rate of clarithromycin resistance (26). However, there has been growing concern regarding the efficacy of clarithromycin triple therapy. Key questions which were considered while preparing this document included the expected eradication rate of clarithromycin triple therapy in North America, the most appropriate duration of therapy, and whether eradication rates have been dropping over time. There are data from other parts of the world to suggest that eradication rates for clarithromycin triple therapy are below 80% (103). In preparing this updated guideline, we identified all randomized, controlled trials conducted in the United States or Canada which have assessed the efficacy of this regimen since 2000 (100, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119). Consistent with other meta-analyses, eradication rates with 7 or 10 days of clarithromycin triple therapy in studies from the US or Canada were indeed below 80%. Eradication rates with 14 days of triple therapy were higher, but only two study arms with 195 subjects were included. This finding is consistent with the most recent and most complete meta-analysis or the world’s literature on this topic which was published by the Cochrane Collaboration (120). For clarithromycin triple therapy, higher eradication rates were reported with 14 vs. 7 days of treatment (34 studies, RR 0.65, 95% CI 0.57–0.75; NNT 12, 95% CI 9–16), and with 14 vs. 10 days (10 studies, RR 0.69, 95% CI 0.52–0.91). Based upon the available data, when triple therapy is utilized in North America, it should be given for 14 days. The lack of recent RCT data on clarithromycin triple therapy makes it difficult to confidently report on temporal trends in eradication rates. To address this issue, we conducted a retrospective analysis of eradication rates for clarithromycin triple therapy at the University of Michigan from 2001–15. Data was divided into 5-year blocks and eradication rates for 10–14 days of triple therapy when given first-line were calculated. In 662 patients, the overall eradication rate was 79.5% (95% CI 77.2–82.4%) with no significant difference in eradication rates for the 3, 5-year blocks (Figure 2, unpublished data). Figure 2. Eradication rates with first-line clarithromycin triple therapy at the University of Michigan (2001–2015). The impact of clarithromycin resistance on the efficacy of clarithromycin triple therapy is well documented. A 2010 meta-analysis reported an eradication rate of 22% for clarithromycin-resistant H. pylori strains compared with 90% for clarithromycin-sensitive strains (121). As such, clarithromycin triple therapy should not be utilized in areas where the rate of clarithromycin resistance is known to be high. The Maastricht/Florence Consensus document published in 2012 recommended against using triple therapy when the rate of underlying clarithromycin resistance exceeds 15–20% (55). Although current large scale data on H. pylori antibiotic resistance in North America are unavailable, recent data from Houston suggest that clarithromycin resistance rates may now fall within that range (122). In the absence of local or even regional H. pylori antibiotic resistance data, it is very important to ask patients about previous exposure to antibiotics for any reason, particularly macrolides and fluoroquinolones, as this provides a proxy for underlying H. pylori antibiotic resistance (123, 124). A recent study confirmed an association between number of previous antibiotic exposures and an increasing risk for antibiotic resistance (125). Similarly, duration of previous macrolide therapy for greater than 2 weeks is also associated with a greater risk of treatment failure with clarithromycin triple therapy (126). Based upon the available data, we conclude that clarithromycin triple therapy consisting of a PPI, clarithromycin, and amoxicillin or metronidazole for 14 days remains a first-line treatment option in regions where H. pylori clarithromycin resistance is known to be low. In regions where clarithromycin resistance exceeds 15%, as may well be the case in many parts of North America, clarithromycin triple therapy should be avoided. All patients should be asked about previous macrolide exposure for any reason. In those with previous macrolide exposure, clarithromycin triple therapy should be avoided. Bismuth quadruple therapy The previous ACG guideline also endorsed the use of 10–14 days of bismuth quadruple therapy composed of a PPI or histamine-2 receptor antagonist, bismuth, metronidazole, and tetracycline. There is very limited data on the efficacy or comparative effectiveness of bismuth quadruple therapy in North America. A literature search identified only two RCTs which included a bismuth quadruple therapy arm (n=172). The mean eradication rate with this regimen given for 10 days was 91% (95% CI; 81–98%). A meta-analysis of studies from around the world comparing clarithromycin triple and bismuth quadruple therapies suggested that the two treatments had similar efficacy, compliance, and tolerability (121). An updated meta-analysis, which included 12 RCTs and 2753 patients, reported intention-to-treat (ITT) eradication rates of 77.6% with bismuth quadruple therapy vs. 68.9% with clarithromycin triple therapy (risk difference=0.06, 95% CI; −0.01 to 0.13). There was significant heterogeneity in the data set, in part attributable to differences in trea
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Gilbert C FAURE
August 21, 2018 6:36 AM
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Immunoglobulin E (IgE)-mediated food allergy is a major issue that affects 2–10% of infants. Here the authors study the epigenetic regulation of the naive CD4+ T cell activation response among children with IgE-mediated food allergy finding epigenetic dysregulation in the early stages of signal transduction through the T cell receptor complex.
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Gilbert C FAURE
August 6, 2018 8:47 AM
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The FSA’s Biannual Public Attitudes Tracker (May 2018) results have been published today. We conduct this tracking survey with consumers in England, Wales and Northern Ireland, to monitor changes in consumer attitudes towards food-related issues and the FSA.
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Gilbert C FAURE
June 19, 2018 8:38 AM
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PEANUT ALLERGY ACCOUNTS FOR THE MAJORITY of severe food-related allergic reactions. It tends to present early in life, and affected individuals generally do not outgrow it. In highly sensitized people, trace quantities can induce an allergic reaction.
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Gilbert C FAURE
May 12, 2018 3:30 PM
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Food allergy affects up to 8% of children in the U.S. There is minimal research to date on food allergy policies that are currently in place in schools and the opinions of parents of children with food allergy on the effectiveness of or need for these policies.
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Gilbert C FAURE
May 7, 2018 11:49 AM
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A new test may point the way to better diagnosis of food allergy and measurement of tolerance during therapy.
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