Complex Insight - Understanding our world
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Complex Insight  - Understanding our world
A few things the Symbol Research team are reading.  Complex Insight is curated by Phillip Trotter (www.linkedin.com/in/phillip-trotter) from Symbol Research
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Adaptive Computation: The Multidisciplinary Legacy of John H. Holland

Adaptive Computation: The Multidisciplinary Legacy of John H. Holland | Complex Insight  - Understanding our world | Scoop.it
John H. Holland's general theories of adaptive processes apply across biological, cognitive, social, and computational systems.
Phillip Trotter's insight:
I first came across John Holland's work in a an article while I was at High School some 30 years ago. A few years later he kindly answered my questions in an out of the blue phone call and then over the years in conversations at conferences and in emails.  I have always been in awe of the breadth of his vision and interests, intrigued by his ideas and appreciated the fact he would take time to encourage research and passionate discussion. Sadly with his passing last year - we lost a truly original insight. Stephanie Forrest and Melanie Mitchells article for the ACM captures the breadth of his interests, his wonderful legacy of ideas and perhaps more importantly  the example he set in his humanity and generosity. Well worth reading.
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The Hidden Power Laws of Ecosystems - Issue 29: Scaling - Nautilus

The Hidden Power Laws of Ecosystems - Issue 29: Scaling - Nautilus | Complex Insight  - Understanding our world | Scoop.it
Here’s how to cause a ruckus: Ask a bunch of naturalists to simplify the world. We usually think in terms of a web of complicated…
Phillip Trotter's insight:

Interesting article - from an ecologists point of view on many of the topics and areas of research familiar to complex adaptive systems researchers but applied against actual ecosystems.

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The Thermodynamic Theory of Ecology | Quanta Magazine

The Thermodynamic Theory of Ecology |  Quanta Magazine | Complex Insight  - Understanding our world | Scoop.it
Nature’s large-scale patterns emerge from incomplete surveys, thanks to ideas borrowed from information theory.
Phillip Trotter's insight:

Awesome article on the Maximum Entropy (MaxEnt) theory proposed by John Harte, professor of ecology at University of California, Berkeley. MaxEnt is a key tool to help calculate the total number of species in ecosystem based on very limited information.

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The man who grew eyes

The man who grew eyes | Complex Insight  - Understanding our world | Scoop.it
Growing nerve tissue and organs is a sci-fi dream. Moheb Costandi met the pioneering researcher who grew eyes and brain cells.
Phillip Trotter's insight:

Interesting article on the work of Yoshiki Sasai  a Japanese biologist and Director of the Laboratory for Organogenesis and Neurogenesis at the research institute RIKEN in Kobe, Japan. Sasai was best known for developing new methods to grow stem cells into organ-like structures

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Deforestation, development may be driving Ebola outbreaks, experts say | Al Jazeera America

Deforestation, development may be driving Ebola outbreaks, experts say | Al Jazeera America | Complex Insight  - Understanding our world | Scoop.it
As humans transform ecosystems and come into closer contact with animals, scientists fear more viral epidemics
Phillip Trotter's insight:

After publishing the link to the paper on ebola antibodies in fruitbats in Bangladesh - wespeculated and were asked regarding deforestation impact - this is a good overview article discussing some of the current discussion points.

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Towards a Methodology for Validation of Centrality Measures in Complex Networks

Towards a Methodology for Validation of Centrality Measures in Complex Networks | Complex Insight  - Understanding our world | Scoop.it

Our empirical analysis demonstrates that in the chosen network data sets, nodes which had a high Closeness Centrality also had a high Eccentricity Centrality. Likewise high Degree Centrality also correlated closely with a high Eigenvector Centrality. Whereas Betweenness Centrality varied according to network topology and did not demonstrate any noticeable pattern. In terms of identification of key nodes, we discovered that as compared with other centrality measures, Eigenvector and Eccentricity Centralities were better able to identify important nodes.

 

Batool K, Niazi MA (2014) Towards a Methodology for Validation of Centrality Measures in Complex Networks. PLoS ONE 9(4): e90283. http://dx.doi.org/10.1371/journal.pone.0090283


Via Complexity Digest
Liz Rykert's curator insight, April 15, 2014 10:50 PM

Love this stuff.

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New book: “Hypernetworks in the Science of Complex Systems”, by Jeffrey Johnson

New book: “Hypernetworks in the Science of Complex Systems”, by Jeffrey Johnson | Complex Insight  - Understanding our world | Scoop.it
The modern world is complex beyond human understanding and control. The science of complex systems aims to find new ways of thinking about the many interconnected networks of interaction that defy traditional ...
Phillip Trotter's insight:

One for the reading list for certain.

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Fast and slow thinking -- of networks: The complementary 'elite' and 'wisdom of crowds' of amino acid, neuronal and social networks

Complex systems may have billion components making consensus formation slow and difficult. Recently several overlapping stories emerged from various disciplines, including protein structures, neuroscience and social networks, showing that fast responses to known stimuli involve a network core of few, strongly connected nodes. In unexpected situations the core may fail to provide a coherent response, thus the stimulus propagates to the periphery of the network. Here the final response is determined by a large number of weakly connected nodes mobilizing the collective memory and opinion, i.e. the slow democracy exercising the 'wisdom of crowds'. This mechanism resembles to Kahneman's "Thinking, Fast and Slow" discriminating fast, pattern-based and slow, contemplative decision making. The generality of the response also shows that democracy is neither only a moral stance nor only a decision making technique, but a very efficient general learning strategy developed by complex systems during evolution. The duality of fast core and slow majority may increase our understanding of metabolic, signaling, ecosystem, swarming or market processes, as well as may help to construct novel methods to explore unusual network responses, deep-learning neural network structures and core-periphery targeting drug design strategies.

 

Fast and slow thinking -- of networks: The complementary 'elite' and 'wisdom of crowds' of amino acid, neuronal and social networks
Peter Csermely

http://arxiv.org/abs/1511.01238 ;


Via Complexity Digest
Complexity Digest's curator insight, November 18, 2015 6:13 PM

See Also: http://networkdecisions.linkgroup.hu 

António F Fonseca's curator insight, November 23, 2015 3:30 AM

Interesting  paper about fast cores and slow periphery,  conflict in the elite vs democratic consensus.

Marcelo Errera's curator insight, November 24, 2015 11:32 AM

Yes, there must be few fasts and many slows.  It's been predicted by CL in many instances.

 

http://www.researchgate.net/publication/273527384_Constructal_Law_Optimization_as_Design_Evolution

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At the Far Ends of a New Universal Law | Quanta Magazine

At the Far Ends of a New Universal Law |  Quanta Magazine | Complex Insight  - Understanding our world | Scoop.it
A potent theory has emerged explaining a mysterious statistical law that arises throughout physics and mathematics.
Phillip Trotter's insight:

Systems of many interacting components — be they species, integers or subatomic particles — kept producing the same statistical curve, which had become known as the Tracy-Widom distribution. This puzzling curve seemed to be the complex cousin of the familiar bell curve, or Gaussian distribution, which represents the natural variation of independent random variables like the heights of students in a classroom or their test scores... click on title to read more.

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How the zebra got its stripes, with Alan Turing

How the zebra got its stripes, with Alan Turing | Complex Insight  - Understanding our world | Scoop.it
Where do a zebra’s stripes, a leopard’s spots and our fingers come from? The key was found years ago – by the man who cracked the Enigma code, writes Kat Arney.
Phillip Trotter's insight:

Alan Turing’s published  his ‘chemical morphogenesis’ research  paper in 1952, 2 years before his tragic and untimely death. The paper opened the discussion on how computation and biology may be at fundamentally linked, a thread which continues to be ripe with exploration today. Great article from Mosaic Science explaining the ideas in turings paper and the 60 years of subsequent research.


 


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Outbreak of Ebola Virus Disease in Guinea: Where Ecology Meets Economy

Outbreak of Ebola Virus Disease in Guinea: Where Ecology Meets Economy | Complex Insight  - Understanding our world | Scoop.it

The precise factors that result in an Ebola virus outbreak remain unknown, but a broad examination of the complex and interwoven ecology and socioeconomics may help us better understand what has already happened and be on the lookout for what might happen next, including determining regions and populations at risk. Although the focus is often on the rapidity and efficacy of the short-term international response, attention to these admittedly challenging underlying factors will be required for long-term prevention and control.

 
Phillip Trotter's insight:

As terrifying and tragic the current Ebola outbreak is - informed discussion on sources, vectors and the interplay of ecology and socioeconomics will be at the heart of finding long term solutions.

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Ebola Virus Antibodies in Fruit Bats, Bangladesh - Volume 19, Number 2—February 2013 - Emerging Infectious Disease journal - CDC

Ebola Virus Antibodies in Fruit Bats, Bangladesh - Volume 19, Number 2—February 2013 - Emerging Infectious Disease journal - CDC | Complex Insight  - Understanding our world | Scoop.it
To determine geographic range for Ebola virus, we tested 276 bats in Bangladesh. Five (3.5%) bats were positive for antibodies against Ebola Zaire and Reston viruses; no virus was detected by PCR. These bats might be a reservoir for Ebola or Ebola-like viruses, and extend the range of filoviruses to mainland Asia.
Phillip Trotter's insight:

As evidence builds that fruit bats may be a vector for the recent ebola outbreak in Western Africa - I was reminded of this paper in CDC's EID journal which found 5 out of 276 (3.5%) tested bats in Bangladesh had antibodies to Ebola. It would be interesting to map ebola outbreaks against natural migration and deforestation paths and see if there is any correlation and to see how other regional antibody presence tests indicate migration as well. The original paper and the EID journal in general are well worth reading. Click image or headling to read more.

 

 

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Self-Assembling Molecules Like These May Have Sparked Life on Earth - Wired Science

Self-Assembling Molecules Like These May Have Sparked Life on Earth - Wired Science | Complex Insight  - Understanding our world | Scoop.it
Scientists have discovered building blocks similar to those in modern RNA that can effortlessly assemble when mixed in water and heated.
Phillip Trotter's insight:

Easily accessible article on the research of Nicholas Hud and team at Georgia Institute of Technology. Hud's research group are searching for the evolutionary precursor to RNA and after 20 years of research are finding promising results.

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The Hidden Geometry of Complex, Network-Driven Contagion Phenomena

The global spread of epidemics, rumors, opinions, and innovations are complex, network-driven dynamic processes. The combined multiscale nature and intrinsic heterogeneity of the underlying networks make it difficult to develop an intuitive understanding of these processes, to distinguish relevant from peripheral factors, to predict their time course, and to locate their origin. However, we show that complex spatiotemporal patterns can be reduced to surprisingly simple, homogeneous wave propagation patterns, if conventional geographic distance is replaced by a probabilistically motivated effective distance. In the context of global, air-traffic–mediated epidemics, we show that effective distance reliably predicts disease arrival times. Even if epidemiological parameters are unknown, the method can still deliver relative arrival times. The approach can also identify the spatial origin of spreading processes and successfully be applied to data of the worldwide 2009 H1N1 influenza pandemic and 2003 SARS epidemic.

 

The Hidden Geometry of Complex, Network-Driven Contagion Phenomena
Dirk Brockmann, Dirk Helbing

Science 13 December 2013:
Vol. 342 no. 6164 pp. 1337-1342
http://dx.doi.org/10.1126/science.1245200


Via Complexity Digest
Phillip Trotter's insight:

This is an awesome insight that needs tested across other datasets to find out how universal it is. Good paper.

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