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Virology and Bioinformatics from Virology.ca
Virus and bioinformatics articles with some microbiology and immunology thrown in for good measure
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Reference set for: Multiple Sequence Alignment and Phylogenies

Papers and books on:

Multiple Sequence Alignment and Phylogenies

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SBAL: a practical tool to generate and edit structure-based amino acid sequence alignments

Summary: Both alignment generation and visualization are important processes for producing biologically meaningful sequence alignments.

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The Tree of Life: 'Danger and Evolution in the Twilight Zone': Guest ...

The Tree of Life: 'Danger and Evolution in the Twilight Zone': Guest ... | Virology and Bioinformatics from Virology.ca | Scoop.it

Both multiple sequence alignment and phylogenetic analysis are problematic in the ‘‘twilight zone’’ of sequence similarity (#25% amino acid identity).

 

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Via Franc Viktor Nekrep, Chris Upton + helpers
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