Darwin replaced it with the bubble-up theory of creation. One of Darwin's nineteenth-century critics, Robert Beverly MacKenzie, put it vividly:
In the theory with which we have to deal, Absolute Ignorance is the artificer; so that we may enunciate as the fundamental principle of the whole system, that, in order to make a perfect and beautiful machine, it is not requisite to know how to make it. This proposition will be found, on careful examination, to express, in condensed form, the essential purport of the Theory, and to express in a few words all Mr. Darwin's meaning; who, by a strange inversion of reasoning, seems to think Absolute Ignorance fully qualified to take the place of Absolute Wisdom in all the achievements of creative skill.
It was, indeed, a strange inversion of reasoning. To this day many people cannot get their heads around the unsettling idea that a purposeless, mindless process can crank away through the eons, generating ever more subtle, efficient, and complex organisms without having the slightest whiff of understanding of what it is doing.