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Friday SNPpets | The OpenHelix Blog

Friday SNPpets | The OpenHelix Blog | Bioinformatics Training | Scoop.it
Latest Tweet. Testify RT @BioMickWatson: Bioinformatics training is essential, but always unfundable. Everyone wants it, noone wants to pay for it.Monday, 09.17.12 18:14 ...
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GTPB - The Gulbenkian Training Programme in Bioinformatics

GTPB - The Gulbenkian Training Programme in Bioinformatics | Bioinformatics Training | Scoop.it
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Upcoming courses

 

GTPB: IPTB13 Introduction to Phylogenetic Tree-Building

http://gtpb.igc.gulbenkian.pt/bicourses/IPTB13

13-14 Jun

Deadline 7 Jun

 

GTPB: AWGSMD13 Analysing Whole-Genome Shotgun Metagenomic Data

http://gtpb.igc.gulbenkian.pt/bicourses/AWGSMD13

27-28 Jun

Deadline 21 Jun

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Rise of the Superbugs

The human race has always been at war with bacteria, but the development of antibiotics in the 1930s and ’40s gave us the upper hand over the bugs that were killing us. Suddenly we were superhuman.
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Downloads and Upgrades: Chimera 1.8, Oncomine NGS Power Tools, Biacore ... - BioInform

Downloads and Upgrades: Chimera 1.8, Oncomine NGS Power Tools, Biacore ... - BioInform | Bioinformatics Training | Scoop.it
Downloads and Upgrades: Chimera 1.8, Oncomine NGS Power Tools, Biacore ...
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Mutation: The Science of Survival

Mutation: The Science of Survival | Bioinformatics Training | Scoop.it
Monster mutants lurk in the myths of many cultures, and we’re fascinated yet fearful of nature’s mutants. But mutants are closer to home than we think. Often invisible, mutations are happening all around us, in every living thing.
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Learning Technologies Summer Forum

Learning Technologies Summer Forum | Bioinformatics Training | Scoop.it
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GTPB: IPTB13 Introduction to Phylogenetic Tree-Building

GTPB: IPTB13 Introduction to Phylogenetic Tree-Building | Bioinformatics Training | Scoop.it
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Course description

The course will cover, at a basic level, building phylogenetic trees based on molecular sequence data. This will include the general context and uses of tree-building, choosing models of DNA and protein evolution, tree-building methods including distance, parsimony, maximum likelihood and Bayesian MCMC, and confidence in results. 

 

Target Audience

Reserchers at all levels, wishing to learn how to perform simple phylogenetic analyses, and build trees.

 

Course Pre-requisites

Basic computing skills, graduate level in Life Sciences

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Coursera

Coursera | Bioinformatics Training | Scoop.it
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bioTheranostics To Present Data on CancerTYPE ID and Breast Cancer Index at 2013 ASCO Annual Meeting | bioTheranostics

bioTheranostics To Present Data on CancerTYPE ID and Breast Cancer Index at 2013 ASCO Annual Meeting | bioTheranostics | Bioinformatics Training | Scoop.it
Data from 11 studies demonstrate the clinical utility and cost-effectiveness of company’s molecular tests for cancer of unknown primary and breast cancer
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IPTB13 Introduction to Phylogenetic Tree-Building | Facebook

IPTB13 Introduction to Phylogenetic Tree-Building | Facebook | Bioinformatics Training | Scoop.it
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Open for Applications till Jun 7th

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Craig Venter: Designing life

Craig Venter: Designing life | Bioinformatics Training | Scoop.it
Biographical documentary about the man who mapped the human genome and created the first synthetic life form - Craig Venter.
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Fundamentals of Bioinformatics and A Librarian's Guide to NCBI ...

In January 2013, the National Library of Medicine issued a call for applicants for a new Bioinformatics training course for librarians. NLM selected 23 librarians to participate in a 4-week fundamentals course online to introduce ...
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Training course in Illumina sequence analysis - SEQanswers

Thread, Thread Starter, Forum, Replies, Last Post. bioinformatics training for WGS 454 and Illumina, hmmngs, Bioinformatics, 2, 09-21-2011 08:01 AM. illumina smallRNA adapter sequence for downstram analysis + miRNA ...
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Developing 21st Century Critical Thinkers [Infographic]

Developing 21st Century Critical Thinkers [Infographic] | Bioinformatics Training | Scoop.it
Download an 11X17 version of the Developing 21st Century Critical Thinkers Infographic by Mentoring Minds.com.

Via Tom D'Amico (@TDOttawa) , Aki Puustinen, Gust MEES, Dennis T OConnor, juandoming
Jenn Alevy's curator insight, May 28, 4:04 AM

I really like this Infographic.

Jane Sowter-Maranion's curator insight, June 2, 9:21 PM

Teacher Librarians are well placed to assist teachers to develop critical thinking skills in students.

joyrosario's curator insight, June 10, 5:19 AM

Interesting parallel to the rational for resource based learning of the late 20th century

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Brainstorm in Progress: MOOCs: Disruption is the Mother of Invention

Brainstorm in Progress: MOOCs: Disruption is the Mother of Invention | Bioinformatics Training | Scoop.it
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Pathway Genomics to Launch Next-Generation Sequencing (NGS ... - Fort Mills Times

Pathway Genomics to Launch Next-Generation Sequencing (NGS ...
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The Evolving use of Badges in Education

The Evolving use of Badges in Education | Bioinformatics Training | Scoop.it
Rewards as a Way to Motivate Students to Learn Today’s schools commonly use grade-based evaluations where students get rewarded for the knowledge they gain.

Via Susan Bainbridge
Stacey Py Flynn's curator insight, June 16, 11:16 AM

Using virtual badges as a reward for learning provides motivation, boosts confidence and provides supports for collaborative learning through positive social interactions. 

Moushira Issa's curator insight, June 16, 5:04 PM

Get recognition for learning that happens anywhere. Then share it in the places that matter.

Paula Iaeger PhD's comment, June 18, 9:43 AM
This is one application of badges that cross generations and circumstances. When workers are offered recognition for the training they receive, there is a desire to know more. A simple certificate might help but a digital badge for its transportability is much better. In a classroom grades of course have their place but what I like is that the natural curiosity is rewarded when a badge is voluntarily pursued. Badges celebrate extra effort, not mediocrity and a just-get-by mentality.
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LIFE TECHNOLOGIES CORP. : Life Technologies Launches Compendia ... - 4-traders (press release)

LIFE TECHNOLOGIES CORP. : Life Technologies Launches Compendia ... - 4-traders (press release) | Bioinformatics Training | Scoop.it
LIFE TECHNOLOGIES CORP. : Life Technologies Launches Compendia ...
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GTPB: AWGSMD13 Analysing Whole-Genome Shotgun Metagenomic Data

GTPB: AWGSMD13 Analysing Whole-Genome Shotgun Metagenomic Data | Bioinformatics Training | Scoop.it

Nick Loman

Twitter: @pathogenomenick

 

Pedro Fernandes's insight:

Course description

In this two-day intermediate-level course we will cover the basics of analysing whole-genome shotgun metagenomics data generated from high-throughput sequencing instruments. This would interest those interested in taxonomic and functional characterisation of complex microbial communities from clinical or environmental samples. Topics covered will include design of sequencing experiments, quality control of data, de novo assembly and co-assembly, mapping reads to reference assemblies, contig clustering, whole-genome and haplotype reconstruction methods, taxonomic assignment of contigs, and cross-sample comparisons of microbial communities. 

 

Target Audience

The course will suit those already familiar with bioinformatic analysis of microbial whole-genome sequences and/or 16S phylogenetic profiling who now wish to gain knowledge of new techniques for whole-genome metagenomic studies.

 

Course Pre-requisites

The course will be performed on Linux workstations and will feature a large hands-on component with real datasets, therefore knowledge of the UNIX command-line is essential, as well as familiarity with microbial genomics and ecology and a basic grasp of statistics.

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Half an Hour: #MOOC - The Resurgence of Community in Online Learning

Half an Hour: #MOOC - The Resurgence of Community in Online Learning | Bioinformatics Training | Scoop.it
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Hamilton Robotics Partners With Illumina To Automate Sample Preparation For ... - BioResearch Online (press release)

Hamilton Robotics Partners With Illumina To Automate Sample Preparation For ... - BioResearch Online (press release) | Bioinformatics Training | Scoop.it
Hamilton Robotics Partners With Illumina To Automate Sample Preparation For ...
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AWGSMD13 Analysing Whole-Genome Shotgun Metagenomic Data | Facebook

AWGSMD13 Analysing Whole-Genome Shotgun Metagenomic Data | Facebook | Bioinformatics Training | Scoop.it
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Open for  applications till June 21st

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Craig Venter: Designing life

Craig Venter: Designing life | Bioinformatics Training | Scoop.it
Biographical documentary about the man who mapped the human genome and created the first synthetic life form - Craig Venter.
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Why every education leader must be a tech visionary | Knewton Blog

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I fully agree.

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Does Your eLearning Course Look Good? Ask These 6 Questions

Does Your eLearning Course Look Good? Ask These 6 Questions | Bioinformatics Training | Scoop.it
How do you make sure that your eLearning courses look good? Ask yourself these six questions!

Via Ana Cristina Pratas, juandoming, Pedro Fernandes
Francisco Javier 's curator insight, May 12, 8:22 PM

Does Your eLearning Course Look Good? Ask These 6 Questions | @scoopit via @juandoming http://sco.lt/...

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Massive Open Opportunity: Supporting MOOCs in Public and Academic Libraries

Massive Open Opportunity: Supporting MOOCs in Public and Academic Libraries | Bioinformatics Training | Scoop.it

What is the role of public and academic libraries in supporting MOOCs (maasive open online courses), or why would MOOCs need libraries?  

 

There are multiple potential roles for libraries in the MOOC development, support, assessment, and preservation process, some of which have been more fully explored than others in the few months since Coursera and EdX began rolling out offerings.

 

One important role has to do with librarians helping faculty ensure the materials they use to create their MOOC presentations and readings are not going to get them or their institutions into trouble as far as copyright content is concerned.

 

Then there's another potential role for libraries to curate and preserve the user-generated content—student work—that is created during a MOOC.

The Library as Content Creator has received considerable attention in the OCLC symposium aside from the possibility of libraries offering MOOCs on research skills, such as how to navigate databases and recognize seminal articles.


Via Fe Angela M. Verzosa
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What It Takes to Be a Bioinformatician | New York Genome Center

What It Takes to Be a Bioinformatician | New York Genome Center | Bioinformatics Training | Scoop.it
RT @wateresa: @BUbioinfo What does it take to be in bioinformatics? writeups frm @nygenome & @BioMickWatson http://t.co/nxFTvtBI26
http://t.co/vYhbd4zorB

Via HaBIc
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