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ROSALIND: an addictive bioinformatics learning site | Byte Size Biology

ROSALIND: an addictive bioinformatics learning site

By Iddo Friedberg on October 2nd, 2012

 

"Rosalind is a joint project between the University of California at San Diego and Saint Petersburg Academic University along with the Russian Academy of Sciences. Rosalind is partly funded by a Howard Hughes Medical Institute Professor Award and a Russian Megagrant Award received by Pavel Pevzner."


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Rescooped by Sergio González from Una visió particular del món universitari
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PhD vs Startup


Via Jordi Villà i Freixa
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Jordi Villà i Freixa's curator insight, May 26, 2013 1:40 PM

discutible, però interessant comprimit de reflexió

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A survey of tools for variant analysis of next-generation genome sequencing data

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Home

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NGS Congress
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Eagle’s third symposium: Will big data and bigger cuts cripple bioinformatics? | Eagle Genomics

Eagle’s third symposium: Will big data and bigger cuts cripple bioinformatics? | Eagle Genomics | Bioinf | Scoop.it
Tools and techniques to stretch the bioinformatics budget Thursday, 21 March 2013 08:30 - 18:30 (GMT) Where: Babraham Research Campus, Cambridge, CB22
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Science And Python: retrospective of a (mostly) successful decade

Interesting talk by Fernando Pérez.


Via Pedro Fernandes
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Building biomimetic synthetic membrane channels out of DNA | KurzweilAI

Building biomimetic synthetic membrane channels out of DNA | KurzweilAI | Bioinf | Scoop.it

Schematic illustration of the channel formed by 54 double-helical DNA domains packed on a honeycomb lattice. Cylinders indicate double-helical DNA domains.


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PLI: a web-based tool for the comparison of protein-ligand interactions observed on PDB structures

PLI: a web-based tool for the comparison of protein-ligand interactions observed on PDB structures | Bioinf | Scoop.it
Motivation: A large fraction of the entries contained in the Protein Data Bank describe proteins in complex with low molecular weight molecules such as physiological compounds or synthetic drugs.

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The Beginners Guide to DNA Sequence Alignment

The Beginners Guide to DNA Sequence Alignment | Bioinf | Scoop.it

About DNA alignment.

 

Gonna have this in mind before Cedric Notredame comes to UAB.
Hope lot's of question will arise from that fruitful visit.

 

"RT @druvus: The Beginners Guide to DNA Sequence Alignment http://t.co/5E2t8th6 #bioinformatics..."

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Rescooped by Sergio González from Next Gen Sequencing (NGS) and Bioinformatics at UVic
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TogoTV - distributing tutorial videos of bioinformatcs resources

TogoTV - distributing tutorial videos of bioinformatcs resources | Bioinf | Scoop.it

I'm amazed by the amount of online platforms offering Bioinformatics Training, that's the way.

Keep it up! ;)

 

"The ease of creating and distributing video tutorials instead of static content improves accessibility for researchers, annotators and curators. This article focuses on online video repositories for educational and tutorial videos provided by resource developers and users. It also describes a project in Japan named TogoTV (http://togotv.dbcls.jp/en/)"


Via Mohamed Nadhir Djekidel, Chris Upton + helpers
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Rescooped by Sergio González from Next Gen Sequencing (NGS) and Bioinformatics at UVic
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The Tree of Life: Elaine Mardis rocks: nice talk on "Next generation sequencing"

The Tree of Life: Elaine Mardis rocks: nice talk on "Next generation sequencing" | Bioinf | Scoop.it

After attending last friday to "Neutrality tests for NGS data" seminar, by Dr. Luca Ferreti at Center for Research in Agricultural Genomics (CRAG)(UAB). Which was very interesting

 

I think i'm gonna appreciate this talk about NGS, let's watch it!


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Install Sublime text editor - Linux Mint Community

Install Sublime text editor - Linux Mint Community | Bioinf | Scoop.it

I'm gonna try this text editor

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Rescooped by Sergio González from The Steep Slope of Bioinformatics!
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PLOS Computational Biology: A Quick Guide to Organizing Computational Biology Projects

PLOS Computational Biology: A Quick Guide to Organizing Computational Biology Projects | Bioinf | Scoop.it
PLOS Computational Biology is an open-access...

Via Neelima Sinha
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Jacob bioinformatics web log

Jacob bioinformatics web log | Bioinf | Scoop.it

It's nice to keep an eye on people blogs

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YBlog - Learn Vim Progressively

YBlog - Learn Vim Progressively | Bioinf | Scoop.it
Sergio González's insight:

Think this is a really nice tutorial, progressive as it says.

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home [MDA 2013]

home [MDA 2013] | Bioinf | Scoop.it
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Three Helpful Guides for Those Working on Genome Assembly « Homologus

Three Helpful Guides for Those Working on Genome Assembly « Homologus | Bioinf | Scoop.it

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Is the Analysis of Gene Expression Based on an Erroneous Assumption?

Is the Analysis of Gene Expression Based on an Erroneous Assumption? | Bioinf | Scoop.it
The MIT-based researcher Rick Young is one of the world’s top molecular biologists.

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The IPython Notebook for Data Science

In this video, I will introduce the IPython Notebook, an open-source, web-based interactive computing environment for Python and other languages. By enabling...

Via Pedro Fernandes
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Rescooped by Sergio González from Bioinformatics Training
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Big genomics data, big scientific impact: New challenges for further ... - Phys.Org

Big genomics data, big scientific impact: New challenges for further ... - Phys.Org | Bioinf | Scoop.it
Big genomics data, big scientific impact: New challenges for further ...Phys.OrgGenomics and next-generation sequencing (NGS) technologies have revolutionized life sciences research.

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Open Access Explained. Well. | Byte Size Biology

Open Access Explained. Well. | Byte Size Biology | Bioinf | Scoop.it

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Analysis Scripts — Biolinux

Analysis Scripts — Biolinux | Bioinf | Scoop.it

Scripts: Hard to learn at first, hard to live without them when mastered.

 

"Scripts are a way of linking tasks together to process large numbers of data items or to automate a series of tasks. Common utility tasks in bioinformatics include things like sequence formatting or blast report parsing."


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Bioinformatics Links Directory | Bioinformatics.ca Links Directory

Bioinformatics Links Directory | Bioinformatics.ca Links Directory | Bioinf | Scoop.it

A simple & concise directory to have near you


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Introduction to python for bioinformatics

import this

 

A talk for the PRBB Technical Seminars series (http://bg.imim.es/technical-seminars/) on python and bioinformatics...

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50 Top Sources Of Free eLearning Courses

50 Top Sources Of Free eLearning Courses | Bioinf | Scoop.it

I'm onto it!

Aren't you? What are you waiting for? Go for it ;)

 

"Whether you are looking for a master’s degree program, computer science classes, a K-12 curriculum, or GED study program, this list gives you50 Top Sources Of Free eLearning Courses - "


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ROSALIND: an addictive bioinformatics learning site | Byte Size Biology

ROSALIND: an addictive bioinformatics learning site

By Iddo Friedberg on October 2nd, 2012

 

"Rosalind is a joint project between the University of California at San Diego and Saint Petersburg Academic University along with the Russian Academy of Sciences. Rosalind is partly funded by a Howard Hughes Medical Institute Professor Award and a Russian Megagrant Award received by Pavel Pevzner."


Via Pedro Fernandes
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